| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0452 |
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| Symbol | trpC |
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| ID | 5868191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 528916 |
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| End bp | 529749 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545533 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001666699 |
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| Protein GI | 167031468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.42981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.418549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGC CGACAGTGCT GGAAAGGATC ATTGCCCGCA AGTTTCAGGA AGTGGCCGAG
CGCAGCGCAC GCGTCAGCCT TGCCGAGCTG GAGGCCCTGG CCAAGGCCGC CGATGCTCCG
CGTGGCTTTG CCAACGCGCT GATCGAGCAG GCCAAGCGCA AGCAGCCGGC GGTGATTGCT
GAAATCAAGA AGGCCTCGCC GAGCAAAGGC GTGATCCGCG AGCACTTTGT GCCGGCGGAA
ATCGCGGTCA GCTACGAGAA GGGTGGCGCT ACCTGCCTGT CGGTGCTGAC CGATGTCGAT
TACTTCCAGG GTGCCGATGT GTACCTGCAG CAGGCTCGCG CAGCAGTTTC CTTGCCGGTA
ATCCGCAAGG ACTTCATGGT CGACCCTTAC CAGATCGTCG AAGCCCGGGC CTTGGGCGCG
GACTGCGTGC TACTGATCGT GTCGGCGCTG GACGACGTAA AGATGGCCGA ACTGGCCGCC
ACTGCCAAGG ATGTCGGCCT TGATGTGCTA GTGGAAGTGC ATGATGGCGA TGAGCTGGAG
CGCGCCTTGA AAACCCTCGA CACGCCGCTG GTTGGGGTGA ACAACCGTAA CCTGCACACC
TTTGAGGTGA GCCTGGAAAC CACCCTCGAC CTGCTGCCGC GCATTCCGCG TGATCGCTTG
GCGATTACCG AGAGCGGTAT TCTCAACCGA GCGGACGTGG AACTGATGGC GATCAACGAG
GTTTACTCGT TCCTGGTCGG CGAAGCGTTC ATGCGTGCCG AACAGCCAGG CCTGGAACTG
CAACGGTTGT TCTTCCCAGA ACAGGTGAAG AAAACTGTAC AGCCATTGGA CTGA
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| Protein sequence | MSVPTVLERI IARKFQEVAE RSARVSLAEL EALAKAADAP RGFANALIEQ AKRKQPAVIA
EIKKASPSKG VIREHFVPAE IAVSYEKGGA TCLSVLTDVD YFQGADVYLQ QARAAVSLPV
IRKDFMVDPY QIVEARALGA DCVLLIVSAL DDVKMAELAA TAKDVGLDVL VEVHDGDELE
RALKTLDTPL VGVNNRNLHT FEVSLETTLD LLPRIPRDRL AITESGILNR ADVELMAINE
VYSFLVGEAF MRAEQPGLEL QRLFFPEQVK KTVQPLD
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