| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0446 |
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| Symbol | |
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| ID | 5868185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 521946 |
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| End bp | 522620 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545527 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001666693 |
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| Protein GI | 167031462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.338349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCCT ACGCTATTGC CCCCTCCATT CTCTCCGCCG ATTTTGCCCG CCTGGGTGAG
GACGTCGACA AGGTATTGGC TGCGGGTGCA GACATCGTTC ACTTCGATGT CATGGACAAC
CACTATGTCC CCAACCTGAC CATTGGTCCG ATGGTTTGCA CCGCCCTGCG CAAGTACGGC
GTCACCGCGC CGATCGACGT GCACCTGATG GTCAGCCCCG TCGACCGTAT CATCGGCGAC
TTCATCGAAG CCGGCGCCAC CTACATCACC TTCCACCCGG AAGCCACACA GCACATCGAC
CGTTCGCTGC AACTGATCAA GGACGGTGGT TGCAAGGCTG GCCTGGTGTT CAACCCGGCC
ACCAGCCTGG ACGCCCTGAA GTATGTGATG GACAAAATCG ACATGGTGTT GCTGATGAGC
GTCAACCCAG GCTTTGGCGG GCAAAAGTTC ATCCCCGGCA CCCTCGACAA ACTGCGCGAA
GCGCGTGCGC TGATCGACGC CAGTGGCCGT GATATCCGCC TGGAAATCGA CGGCGGCGTG
AACGTCAACA ACATCCGCGA GATCGCTGCC GCTGGCGCTG ACACCTTCGT GGCTGGCTCG
GCGATCTTCA ACGCCCCGGA CTACCAGGAA GTCATCGCCA AGATGCGCGC CGAACTGGCC
CTGGCCCGCC CATGA
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| Protein sequence | MQPYAIAPSI LSADFARLGE DVDKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCTALRKYG
VTAPIDVHLM VSPVDRIIGD FIEAGATYIT FHPEATQHID RSLQLIKDGG CKAGLVFNPA
TSLDALKYVM DKIDMVLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR DIRLEIDGGV
NVNNIREIAA AGADTFVAGS AIFNAPDYQE VIAKMRAELA LARP
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