| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0442 |
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| Symbol | |
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| ID | 5868181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 517439 |
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| End bp | 518563 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545523 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001666689 |
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| Protein GI | 167031458 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.826065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGAAGTCGAA CGCTGCAACC AGCGAAACGC TGGTCAGCTT CCGTGGTGTG
CAGAAGAGCT ACGACGGCGA GTCGCTGATC GTCAAAGACC TCAACCTGGA TATCCGCAAG
GGCGAGTTCC TTACCCTGCT TGGCCCGTCC GGCTCCGGTA AAACCACCAG CCTGATGATG
CTGGCCGGTT TTGAAACCCC CACCGCCGGT GAAATCCAGC TGGCCGGGCG CTCGATCAAC
AACGTGCCGC CGCACAAGCG CGATATCGGC ATGGTGTTCC AGAACTACGC GCTGTTCCCG
CATATGACCG TGGCCGAGAA CCTGGCCTTT CCGCTGACCG TGCGCAATCT GAGCAAGACC
GACATCAGCG AGCGGGTCAA GCGCGTGCTG AACATGGTCC AGCTCGATGC CTTCGCCAAA
CGCTACCCCG GCCAGCTGTC CGGCGGCCAG CAACAGCGTG TGGCGCTGGC CCGGGCGCTG
GTGTTCGAGC CGCAGCTGGT GCTGATGGAC GAACCGCTTG GTGCGCTGGA CAAGCAGCTG
CGTGAACACA TGCAGATGGA GATCAAGCAC ATTCACCAGC GCCTGGGTGT GACCGTGGTG
TACGTGACCC ACGACCAGGG CGAAGCGCTG ACCATGTCCG ACCGCGTGGC GGTGTTCCAC
CAGGGCGAAA TCCAGCAGAT TGCCGACCCG CGCACGCTGT ATGAAGAGCC CTGCAATACC
TTCGTCGCCA ACTTCATCGG CGAAAACAAC CGCATCAACG GCACCCTGCT GGCCAGCGAT
GGCAAACGCT GCCAGGTGCA GTTGCCGCGC GGTGAACGGG TCGAGGCGCT GGCGGTGAAC
GTCGGCCAGG CCGGCGAGCC GGTAACCCTG TCGATTCGCC CGGAGCGTGT GCGCCTGAAC
GGCCACAGCG AAAGCTGCGT CAACCGCTTC TCTGGCCGGG TGGCCGAGTT CATTTACCTG
GGCGACCACG TGCGGGTGCG CCTGGAAGTT TGCGGCAAGG GCGACTTCTT CGTGAAACAG
CCGATTGCCG AGCTCGACCC GGCATTGGCC GTGGGCGATG TGGTACCGCT GGGCTGGGAG
GTGGAGCACG CCCGCGCGCT CGATCCGATT GCCGAAGCCC ATTGA
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| Protein sequence | MSEAKSNAAT SETLVSFRGV QKSYDGESLI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM
LAGFETPTAG EIQLAGRSIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLTVRNLSKT
DISERVKRVL NMVQLDAFAK RYPGQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL
REHMQMEIKH IHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIADP RTLYEEPCNT
FVANFIGENN RINGTLLASD GKRCQVQLPR GERVEALAVN VGQAGEPVTL SIRPERVRLN
GHSESCVNRF SGRVAEFIYL GDHVRVRLEV CGKGDFFVKQ PIAELDPALA VGDVVPLGWE
VEHARALDPI AEAH
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