| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0437 |
|---|
| Symbol | |
|---|
| ID | 5868176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 511471 |
|---|
| End bp | 512142 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545518 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001666684 |
|---|
| Protein GI | 167031453 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAA TGATCCTGGC AGCGGGCAAG GGCGAGCGCA TGCGCCCGCT GACCCTGCAC
ACCCCCAAAC CGTTGGTCCC GGTCGCCGGC CAGCCGCTGA TCGAATACCA CCTGCGCGCC
CTGGCGGCAG CGGGCGTCAC TGACGTGGTG ATAAACCACG CCTGGCTCGG CCAGCAGATC
GAAGACCATC TGGGTGACGG CAGCCGCTTC GGCCTGAGCA TCCGCTATTC ACCTGAAGGT
GAGCCGCTGG AAACCGGCGG CGGTATCTTC AAGGCCCTGC CTTTGCTGGG TGATGCGCCT
TTCCTGTTGG TGAACGGCGA TGTCTGGACC GATTACGATT TCGCGCGTCT GCAGGCTCCC
CTGCAAGGCC TGGCTCACCT GGTGCTGGTT GACAACCCTG GCCATCACGG GCGCGGTGAC
TTCCGTCTGG TGGGTGAGCG GGTGGTCGAT GGTGACGACG CGCCGGGCAC CTTGACGTTC
AGTGGCATTT CGCTGCTGCA CCCGGCGTTG TTCGATGGTT GCCAGGCGGG CGCCTTCAAG
CTGGCACCGT TGCTGCGCCA GGCCATGACG GCCGGCAAGG TCTCTGGCGA ACACTACCGT
GGGCACTGGG TGGATGTCGG TACGCTCGAA CGCCTGGCCG AGGTTGAGCG TTTGATTGGC
GAGCGCGCCT GA
|
|---|
| Protein sequence | MKAMILAAGK GERMRPLTLH TPKPLVPVAG QPLIEYHLRA LAAAGVTDVV INHAWLGQQI
EDHLGDGSRF GLSIRYSPEG EPLETGGGIF KALPLLGDAP FLLVNGDVWT DYDFARLQAP
LQGLAHLVLV DNPGHHGRGD FRLVGERVVD GDDAPGTLTF SGISLLHPAL FDGCQAGAFK
LAPLLRQAMT AGKVSGEHYR GHWVDVGTLE RLAEVERLIG ERA
|
|---|
| |