| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0435 |
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| Symbol | |
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| ID | 5868174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 507526 |
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| End bp | 510324 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545516 |
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| Product | organic solvent tolerance protein |
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| Protein accession | YP_001666682 |
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| Protein GI | 167031451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00337227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA AATCCCCCGC GTTTCGTAGA AAGTTTCCGT TGCTGGTAAC CGGCGGTCTG
CTGGCCCTGC AACCTCTGGC CACCTCATAT GCAGTGGCAG CCGAACAGTT CGACTGCCAA
GTGTCCGCCG CCGGTGGCTG GGACTGCAAG CCCAAGGCCC CAGTCAACAA CCTGCCGCCA
CGCCCGGTGC ACGAAGGTGC GGCCGTCAGC TCCGGCACTG AAGCCGCCAG CGAAGGCGAA
ACCGCGGACC GGCCGATGCT GGTTACCGAG GCCAAGGGCC GTGCCCTGAA GTCGCGCAGC
GAAGACTACA GCCACCTGGA CTGGGTGCCG CGTGAAAAGC TCACCGCCGC GCAGCTGGCC
GAAACCGGCC CGTACTGCGG TGGCGCCTAT GTCGAGCCAA CCCGCCCGGG CATGGCCGAC
ACCACGCCGA AGGATGAGTC GCCGACCTAC ATCAACGCCA AGGTATCCAA GTACCAGCAG
GAGCAGCAGA TCGCTACCCT CGCCGGTGAC GTGGTGATGC GCCAGGGCAG CATGCAGGCC
GAGGCCGACG AGGCCAACCT CTACCAGACC GAAAACCGTG GCGAGCTCAA GGGCAACGTC
AAGATCCGTG ACAACGGGTC GTTGGTGGTC GGTGACGAGG CGCAAATCCA GCTCGACACC
GGCGAAGCCC AGGTCGACAA CGCCGAATAC GTGATGCACA AGTCGCACAT CCGCGGCAGT
GCCCTGTACG CCAAGCGTGG CGAGAACGCC ATCATCCGCC TCAAGGACGG TACGTACACC
ACCTGCGAAC CGGGCAGCAA CGCCTGGCAG CTGAAGGGCA ACAACATCAC CCTGAACCCG
GCCACCGGCT TCGGTACCGC GACCAACGTT ACGCTGCGGG TCAAGGATTT CCCGGTGTTC
TACACACCGT ACATCTACTT CCCGATCGAC GACCGTCGCC AGTCCGGCTT CCTGCCGCCA
TCGTTCAGCA CCAGCAGCGA TACCGGCTTC ATGCTGGTCA CGCCGTACTA CTTCAACCTG
GCGCCGAACT ACGACGCCAC GTTGTACCCG CGTTACATGG CCAAGCGCGG CCTGCTGATG
GAAGGCGAGT TCCGCTACCT GACGCCTTCG AGCGAAGGTC AGTTTGGCGG TGCGTACCTG
AACGACAAGG ATGACGACCG TAAAGAGCAG ACTGACTACA AAGATCAGCG CTGGATGGTC
AACTGGCAGC ACAAAGGTGG GCTGGACGAG CGCCTGATGA CTGAGGTGGA CTACACCGAC
ATCAGCGACC CGTTCTACTT CCAGGACCTG GAGTCCGACC AGATCGGCGT GGAAAGCCGT
GACCTGCTGA ACCAGCAGGG TGCGCTGACC TACCGTGGCG ACAACTACAC CGCGCGATTG
AACGTGCATG CCTACGAGAT GGCGACCATC TCGCAGATCA CACCGTATGA TCGCCTGCCG
CAGATCACGC TCAATGGCGT ATTGCCCTAC AATCCGGGCG GCCTGGTTAT GGGTTACGAG
AGCGAGGCGG TACGCTTCGA CCGCGACCTG AAGGACGACT TCGTACGGGA TAAAGATGGC
AACCCTGACT TCTCGGCAGG TGCAGCCGGC CGTCGTCTGG ACCAGAACGT CAGCGGTATT
GCCCGCGCCA ACGGCAACCG CTTCAACGTC GCGCCGTCGA TCAGCCTGCC GATGGAAGCC
AGCTATGGCT ACCTGACCCC TAAGCTGAAG TATGCGTACA CCCACTACGA CCTAGACCTG
GACAGCCAGG GCAAGGCGCA GGCAATCGCG CAGTCCGCCA ACCCGGCGTA TGGCAGCTAT
AACAGCTCGC TGAACCGCGA CGTACCGATC TTCAGCGTGG ATAGCGGCCT GTACTTCGAC
CGCAACACGT CGTTGTTCGG CACGAACTAC AAGCAGACCC TCGAGCCGCG CCTGTTCTAT
CTCAATGTCC CTTACAAGGA CCAGAGAGAT ATCCCGATCT TCGACTCAAG CGAAACGCTG
TTCAGTTACG ACTCACTGTT CCGCGACAAT CGATTCAGCG GCACGGACCG CATCGGCGAT
GAGAACAAAT TGTCGCTTGG CGTAACTACT CGCTGGATCG AGGATAACGG GTTCGAGCGG
CAAAACTTCA GCATCGGCCA AGCTTACTAC TTCAAGGACC GAAAGGTTCA GTTGCCCGGC
ATCTACTATA AAGACCGACA GTCCGCTCAG TCCGATACCT CGCCGTACGC GCTTGTATAT
AACTACTACT TTAACCGTGA CTGGCGCTTC AACTCGGACT TCAACTGGGA TCCGGACAGC
CGCAGCACCC GATCAGGCAG CGCGATGTTC CATTACCAGC CTGAAGACAA CCCGAATAAA
GTGGTCAACC TCGGCTACCG CTATCGTAAT GACACCATTA TTTACGACTC GACCACAGGT
ACGTGGAAAG AGGGTGGCAG CTATGGCAAC CCAGGCGACC CGAACTACAT CAAGGACTAC
TACAAGATCC AGCAGCATGA CTTCTCGGTC ATCTGGCCGA TCGTTCCGCA GTGGAGCGTC
ATCGCTCGCT GGCAGCATGA CTACAACCGC AACCGCACCC TGGAAGCCAT GGGCGGTTTC
GAGTACGACA ACTGCTGCTG GAAGCTGCGC CTGATCAACC GCTACTGGAT CGATTACGAC
GACTTCAGCC AAGCCCTCCC GGCGAACGAA AAAGGCGACC ACGGTGTCTT CCTTCAGATC
GTCCTGAAAG GCCTCGGTGG CGTAGTTGGC AACAAGGTCG AGTCTTTCCT CGACCAAGGC
ATTCAAGGTT ACCGTGAACG TGAAGACCAA GCTTATTGA
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| Protein sequence | MALKSPAFRR KFPLLVTGGL LALQPLATSY AVAAEQFDCQ VSAAGGWDCK PKAPVNNLPP
RPVHEGAAVS SGTEAASEGE TADRPMLVTE AKGRALKSRS EDYSHLDWVP REKLTAAQLA
ETGPYCGGAY VEPTRPGMAD TTPKDESPTY INAKVSKYQQ EQQIATLAGD VVMRQGSMQA
EADEANLYQT ENRGELKGNV KIRDNGSLVV GDEAQIQLDT GEAQVDNAEY VMHKSHIRGS
ALYAKRGENA IIRLKDGTYT TCEPGSNAWQ LKGNNITLNP ATGFGTATNV TLRVKDFPVF
YTPYIYFPID DRRQSGFLPP SFSTSSDTGF MLVTPYYFNL APNYDATLYP RYMAKRGLLM
EGEFRYLTPS SEGQFGGAYL NDKDDDRKEQ TDYKDQRWMV NWQHKGGLDE RLMTEVDYTD
ISDPFYFQDL ESDQIGVESR DLLNQQGALT YRGDNYTARL NVHAYEMATI SQITPYDRLP
QITLNGVLPY NPGGLVMGYE SEAVRFDRDL KDDFVRDKDG NPDFSAGAAG RRLDQNVSGI
ARANGNRFNV APSISLPMEA SYGYLTPKLK YAYTHYDLDL DSQGKAQAIA QSANPAYGSY
NSSLNRDVPI FSVDSGLYFD RNTSLFGTNY KQTLEPRLFY LNVPYKDQRD IPIFDSSETL
FSYDSLFRDN RFSGTDRIGD ENKLSLGVTT RWIEDNGFER QNFSIGQAYY FKDRKVQLPG
IYYKDRQSAQ SDTSPYALVY NYYFNRDWRF NSDFNWDPDS RSTRSGSAMF HYQPEDNPNK
VVNLGYRYRN DTIIYDSTTG TWKEGGSYGN PGDPNYIKDY YKIQQHDFSV IWPIVPQWSV
IARWQHDYNR NRTLEAMGGF EYDNCCWKLR LINRYWIDYD DFSQALPANE KGDHGVFLQI
VLKGLGGVVG NKVESFLDQG IQGYREREDQ AY
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