| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0433 |
|---|
| Symbol | pdxA |
|---|
| ID | 5868172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 505240 |
|---|
| End bp | 506229 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641545514 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001666680 |
|---|
| Protein GI | 167031449 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCCC TGCGCTTCGC CGTCACGCCC GGCGAGCCGG CCGGCATAGG TCCCGACCTG
TGCCTGCTGC TCGCCGCAGA CGCCCAGCCT CATCCCCTGA TCGCCATCAC CAGCCGTGAC
CTGCTCGCCG AGCGGGCCAC GCAGCTGGGG CTGGCCGTCA ACCTGCTGTC AGTAGCCCCA
GGCCAATGGC CTGAGCAGCC GGCGCCAGCC GGTAGCCTGT ACGTTTGGGA TACCCCCCTG
GCAGCGCCCG TAACATCAGG CCATCTCGAC AAAGCCAACG CCGCGTTCGT GCTGGAAACC
CTGACCCGCG CGGGCAAAGG CTGCCTGGAC GGGCACTTCG CCGGGATGAT CACCGCCCCG
GTGCACAAGG GTGTGATCAA TGAAAGCGGT ATCGCCTTTT CCGGGCATAC CGAGTTCCTT
GCCGAACTGA CCCATACCGC GCAAGTGGTG ATGATGCTGG CGACCCGTGG CCTGCGCGTG
GCGCTTGTAA CCACGCACCT GCCGCTGCGT GATATTGCCG ACGCCATCAC AGCCGAGCGC
ATCGAACGTG TAACCCGTAT CCTGCATGCC GACATGCGCG ACAAGTTCGG CATTGCCAAC
CCGCGTATTC TGGTGTGTGG CCTCAACCCG CATGCGGGCG AGGGCGGCCA CCTGGGCCGC
GAGGAAATCG ACATCATCGA GCCGACCCTG GCCCGCCTGC GCACCGAAGG CATGGACCTA
CGCGGGCCGC TGCCGGCCGA TACCCTGTTT ACCCCCAAAT ATCTGGAGCA CTGCGATGCG
GTGCTGGCGA TGTACCACGA CCAGGGCCTG CCCGTACTCA AGTACAAAGG CTTCGGCGCT
GCAGTGAACG TGACCCTGGG CCTGCCGATC ATCCGTACAT CGGTCGATCA CGGCACCGCC
CTGGACCTGG CCGGCACCGG CAAGGTCGAC ACCGGCAGCC TTCGCGTCGC GCTGGAAACC
GCCTACCAGA TGGCCGAGAA CCGACCATGA
|
|---|
| Protein sequence | MKPLRFAVTP GEPAGIGPDL CLLLAADAQP HPLIAITSRD LLAERATQLG LAVNLLSVAP
GQWPEQPAPA GSLYVWDTPL AAPVTSGHLD KANAAFVLET LTRAGKGCLD GHFAGMITAP
VHKGVINESG IAFSGHTEFL AELTHTAQVV MMLATRGLRV ALVTTHLPLR DIADAITAER
IERVTRILHA DMRDKFGIAN PRILVCGLNP HAGEGGHLGR EEIDIIEPTL ARLRTEGMDL
RGPLPADTLF TPKYLEHCDA VLAMYHDQGL PVLKYKGFGA AVNVTLGLPI IRTSVDHGTA
LDLAGTGKVD TGSLRVALET AYQMAENRP
|
|---|
| |