| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0427 |
|---|
| Symbol | |
|---|
| ID | 5868166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 499082 |
|---|
| End bp | 500356 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641545508 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001666674 |
|---|
| Protein GI | 167031443 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.225763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG TTATAGACCG ACGCCTGAAC GGCAAGAACA AGAGCACGGT CAACCGCCAA
CGCTTCCTGC GGCGGTACCG CGAACACATC AAGAAAGCCG TCGAAGAGGC GGTGAGCCGC
CGTTCCATCA TGGACATGGA ACACGGCGAG CAAATCAGCA TTCCCGGCCG CGACATCGAC
GAGCCGGTGC TGCACCATGG TCGCGGGGGC AAACAGACCA TCGTGCACCC TGGCAACAAG
GAATTCACCG CCGGTGAACA CATCCCGCGC CCGCAAGGCG GTGGAGGTGG CGGCGGCGGT
CGCGGTAAAG CGGGCAACTC CGGCGAGGGC ATGGACGAAT TCGTCTTCCA GATCACTCAG
GAAGAGTTTC TCGAATTCAT GTTCGAGGAC CTCGAGCTGC CCAACCTGGT CAAGCGTCAC
CTGACGGGCG CCGACACCTT CAAGACCGTG CGCGCCGGTA TCGCCAACGA AGGCAACCCG
TCGCGTATCA ACATCGTGCG CACCCTGCGT TCGGCCCACG CCCGGCGCAT CGCCCTGACC
GGCAGCAGCC GCGCCCTGTT GCGTGAAGCG CAAAAGGAAC TGGACCGCCT GCGGGTCGAA
GAGCCAGACA ACTTCACCGA TATCCAGGAA GTCGAACAGG AAATCGAACG CTTGAAGGCG
CGCATCAACC GCCTGCCCTT CCTCGATACC TTCGACCTCA AGTACAACCT GCTGGTCAAA
CAACCCAACC CCAGCTCGAA GGCGGTGATG TTCTGCCTGA TGGACGTATC CGGCTCGATG
ACCCAGGCCA CCAAGGACAT CGCCAAGCGC TTCTTCATCC TGCTGTACCT GTTCCTCAAG
CGTAACTACG ACCGCATCGA AGTGGTGTTC ATTCGCCATC ACACCAGTGC CCGTGAAGTC
GATGAGGAAG AGTTCTTCTA CTCGCGGGAA ACCGGCGGCA CCATCGTCTC CAGCGCCCTG
AAGTTGATGC AGGAGATCAT GGCCGAACGC TACCCGGCCA GCGACTGGAA CATCTACGCC
GCACAAGCCT CCGACGGCGA CAACTGGAAC GACGACTCGC CGATCTGCCG CGACATCCTC
TCCAAGCAGA TCATGCCGCA TGTGCAGTAC TACACTTACG TTGAGATCAC CCCCCGTGAA
CACCAGGCGC TGTGGTATGA ATACGAGCGC ATCGGCGAAG CCTACCCCGA CACGTTCGCC
CAGCAGCAGC TGGTATCGGC CGGCGACATC TACCCGGTCT TCCGTGAACT CTTCCAACGC
AGGTTAGCCA CATGA
|
|---|
| Protein sequence | MSYVIDRRLN GKNKSTVNRQ RFLRRYREHI KKAVEEAVSR RSIMDMEHGE QISIPGRDID
EPVLHHGRGG KQTIVHPGNK EFTAGEHIPR PQGGGGGGGG RGKAGNSGEG MDEFVFQITQ
EEFLEFMFED LELPNLVKRH LTGADTFKTV RAGIANEGNP SRINIVRTLR SAHARRIALT
GSSRALLREA QKELDRLRVE EPDNFTDIQE VEQEIERLKA RINRLPFLDT FDLKYNLLVK
QPNPSSKAVM FCLMDVSGSM TQATKDIAKR FFILLYLFLK RNYDRIEVVF IRHHTSAREV
DEEEFFYSRE TGGTIVSSAL KLMQEIMAER YPASDWNIYA AQASDGDNWN DDSPICRDIL
SKQIMPHVQY YTYVEITPRE HQALWYEYER IGEAYPDTFA QQQLVSAGDI YPVFRELFQR
RLAT
|
|---|
| |