Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0425 |
Symbol | cca |
ID | 5868164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 496355 |
End bp | 497461 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545506 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_001666672 |
Protein GI | 167031441 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.676476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCT ACAAAGTCGG CGGCGCCGTG CGCGACCGCC TGCTCGGCCG CCCGGTCAGC GATATCGACT GGCTGGTGGT TGGCGCTACC GTCGAAGAAA TGCTTGCCAA GGGCTACCGG CCGGTCGGTG CCGATTTCCC GGTGTTCCTG CACCCGAAAA CCGGCGAGGA GTACGCCCTG GCGCGCACCG AGCGCAAGAG TGGGCGCGGC TACGGTGGGT TTACCTTTCA TGCCAGCCCC GACGTCACCC TGGAAGAAGA CCTGATCCGC CGCGACCTCA CCATCAATGC GATGGCTGAA GATGAAGCGG GCACGGTGTA CGACCCCTAC CATGGCAAGG ACGATCTCGA TCAACGCCTT TTGCGCCATG TTTCCCCGGC ATTCGCCGAA GATCCTCTGC GCGTACTACG CGTCGCGCGC TTTGCTGCTC GTTATGCGCC TCTGGGTTTC CGGGTTGCCG ACGAGACCCT GGAACTGATG CGCCAGATCA GTGCCTCAGG CGAACTGCAG GCACTGACCG CCGAGCGCAG CTGGAAGGAA ATCGAGCGCG CGCTGATGGA GGCTCGCCCC CAGGTGTTCT TCCAAGTGCT GGGCGCTTGC GGCGCCCTGC ACGAGCTACT GCCTGAGCTT GTCGACGATA CACAGGCCCT GGCGGCGCTG GAGCAAGCCG CAGCGCACGA ACAGCCGCTG CACGTGCGCT GGGCCTGCCT GTTGCGAGGG CTGGCACCGG CGCCGATCAA AACCGTCAAC CAGCGCCTCA AGGCACCACG GGAATGCCAG GAACTGGCCT TACTTACCGG AGAGTGCCTG GCGCAGGGTA ACCAGGCGCA GGAGCTACCA GCCACGGCAC TGCTGGAGCT GTTGCAGAAA TTCGATGTGT ACCGGCGACC GCAGCGGTTC GAGGATTTCA TTGTCGTGTG CGAGATGGCG GCGCTGGGCG ATGGCAAGTC GAGTTATCCA CAAGCCGATT ATCTGCGTGG CGCAGCAGCA GCGGCGCGAG CGGTGGATGT GAAGCCGCTG GTGCAAGCCG GGCTGACGGG CCAGGCGCTG GGCGAAGCGC TCAAGCGTGA GCGGCTGAAG GCTGTCGAGG CTTACAAACG CAGTTGA
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Protein sequence | MHIYKVGGAV RDRLLGRPVS DIDWLVVGAT VEEMLAKGYR PVGADFPVFL HPKTGEEYAL ARTERKSGRG YGGFTFHASP DVTLEEDLIR RDLTINAMAE DEAGTVYDPY HGKDDLDQRL LRHVSPAFAE DPLRVLRVAR FAARYAPLGF RVADETLELM RQISASGELQ ALTAERSWKE IERALMEARP QVFFQVLGAC GALHELLPEL VDDTQALAAL EQAAAHEQPL HVRWACLLRG LAPAPIKTVN QRLKAPRECQ ELALLTGECL AQGNQAQELP ATALLELLQK FDVYRRPQRF EDFIVVCEMA ALGDGKSSYP QADYLRGAAA AARAVDVKPL VQAGLTGQAL GEALKRERLK AVEAYKRS
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