| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0424 |
|---|
| Symbol | |
|---|
| ID | 5868163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 495727 |
|---|
| End bp | 496236 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641545505 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_001666671 |
|---|
| Protein GI | 167031440 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.586286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTGA GCACGGTTTA CCTGGGGCTC GGCAGCAACA TCGACCGTGA AGCGCATTTG
TGCGCCGGGC TCGATGCGTT GGCCGGTATC CTGACGGACA TGCATTGCTC GCCGGCGTTC
GAAAGCCAGG CGGTGGGGAT CAAGAGCGGG CCGTTCATCA ACTTCGTGGT GACCGGCAAA
ACCGCGTTGC CGTTGATCGA GCTGGACCGT CGACTGAAGT TCATCGAGGC CGACAACGGC
CGCTATGCCC CGGACCGCAA AGGCTTGCCA CTGGATATCG ACGTGCTGAT GTATGACGAT
TTGCACGGTA CTTTCGACGG GCTGGTGCTG CCTCGCGCCG AGATCTTGAA AAACGCTTTT
GTGTTGTGGC CGCTGTCGCT GCTGGCCCCC GAACTGGTAC ATCCGGCGGC GGGCAAGGGC
ATGGCGCAGT TATGGCAGGA GGCGCAGATC GATCAGGTGC TGGCCCCGGT AGCCTTCGAG
TGGCGCGGGT TGCAGCTGAC GCCTATCTAA
|
|---|
| Protein sequence | MSLSTVYLGL GSNIDREAHL CAGLDALAGI LTDMHCSPAF ESQAVGIKSG PFINFVVTGK
TALPLIELDR RLKFIEADNG RYAPDRKGLP LDIDVLMYDD LHGTFDGLVL PRAEILKNAF
VLWPLSLLAP ELVHPAAGKG MAQLWQEAQI DQVLAPVAFE WRGLQLTPI
|
|---|
| |