| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0409 |
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| Symbol | |
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| ID | 5868147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 476317 |
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| End bp | 478617 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641545489 |
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| Product | coenzyme PQQ biosynthesis protein PqqF |
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| Protein accession | YP_001666656 |
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| Protein GI | 167031425 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | [TIGR02110] coenzyme PQQ biosynthesis probable peptidase PqqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG CCACCCGCCA CCTCACCCTC GCCAACGGCC TGCAGCTTAC CCTGCGCCAT
GCCCCGCGCC TGAAGCGCGC GGCCGCCGCA TTGCGGGTGC ACGCGGGTAG CCATGACGCG
CCGGGAAAAT GGCCAGGGCT GGCCCACTTC CTCGAGCACC TGTTCTTCCT CGGCACCCCG
CGCTTCCCCC TGGACGATGG CCTGATGCGC TACGTGCAGG CCCTCGGTGG CCAGGTCAAC
GCCAGTACCC GTGAACGCAC CACCGATTTT TTCTTCGAAG TCCCGCCTAA TGCCTTGGCC
GCAGGCCTCG AGCGCCTGTG CCAGATGCTG GCCGAGCCTG ACCTGGGCAT CGCGCGCCAA
CGCCGCGAGC GCGAAGTGAT TCACGCCGAG TTCATCGCCT GGTCGCGCAA CCCACAGGCC
CAGCAGCAAT TCGCCTTGCT GCAGACGCTG TCGCCCGCTC ATCCGCTGAG CGCTTTTCAT
GCCGGCAACC GATACACCCT GGCCCTGCAG GACCCGGCCT TCCAGCAAGC GCTTGGGGGC
TTTCACCGGC GCTTTTACCA AGGCGGCCAG ATCGTCTTGA GCCTATGCGG CCCGCAACCG
CTGGATGAAC TGGAGCAACT GGGCCGGCAG CATGCTCAGC AGTTCGCCAC GGGCACGCGA
GTACCGCACC TTCAGCCACC GCCCCTGTCG GCAGCGACTA TGCCACTGGC TTTTATCCAC
GAGCACCTTC CGGCAGGTGC CGAGCAGGCG CTGGAACTGC TGATTGCCTG CCTGAATGAC
AGCCGCCCAG GTACCTGGCT GGGTACACTG CGCGAGCGTG GCTGGCTGCA AGGTTTCAAG
GCCGAAAAGC TGTATGCCTT CGCCGGGCAG TTGCTGTGGC ACCTGGACCT GAAGCTCAGC
GCCAACGCCT GCCCAGATGA AGCCAATGAC CTGCTGCACG GTTGGTTCAA TTTCATCCGA
CAAGCCGATC TCGCACAGCT GAACCGTGAC TTCGGCTTGC TGCAGCACAG CGGCGAACGC
AGTGCCAGCG CACTTGAACT GGCCCGCCGG GACAGTACCG GGTTGCCGTT CAGCCAGTTG
GATACACAAG GTTTGCAGGC CCTTCGTGCC CTGCTGGATG ACCTGCCATG CAGCAATCAT
GGGCAATGGC AGATACCCAC GGTCGAGCCG TTGCTGATGG CTGACTTACC CACCGCCATG
GCGCAGCCTC TACCGAACGC ACTGAAGATC AGTGACCAGC TCCCCGGCAC CCGCCAATAT
GCGGCACTCT ACTTACGCTG GCACGTGCCT TCGCCTGTGC GCCAGCGCTT GCAGGGCGTG
CTTGAACAGG CCCTCGCGCC GCTGCAGGAG CGATGTGAAC GCGCCTCGGT GCAACTGCAA
TACACCACCG CAGGGGAATA CTGGCAGTTG CGCTGCGCCG GGCTGCCGGC CGCGGTGCTG
CGCGCAGTGC CGCAGGCCTT GGCTTTGATG CTCACCCCCC CTGCCAGTTG CTGGCTGCCC
AGCGCGGCGC CGCCCCCGGC ACTGATCCCT ATCAGGGCCT TGCTCAAGCA ACTGCCAGAC
ACGGTGCTGC ATACCCCGCC CACAGCGGCA CCGGCCGGCA CGCTGAAACA GCAGCAACTC
GACAGCCTGT GGCAGCACGC AAACTGGCAT GGCCTGGCTG CGGGCTTCGA CGATGCCGCG
CTGAACGCCT TGGCTACCGC GTTGCAGCAC TGCCCCGGGC AAGGCGCACG GCCTGGCTCC
CTGCCCACAT GGGCCAACCG TCGCTGGCAG CATGCCGAAG TGGCTGGCAG CGAATATGCC
CTGCTGCTGT TCTGCCCGCT GCCTCCCGCC AGCGAAGCCG CAGGCCGCCT GCTAGCGCAA
CTGCTGCAGG GGCCGGTTTA CCAACGCCTG CGGGTAGAGT TGCAACTCGG CTACGCGGTG
TTCAGCGCCT TTCGTCAGGT CGAGGGGGTC GGCGGTCTAC TGTTCGGCGT GCAGTCCCCC
CACACCGGCC AAGCGCAGGT CCTCGACCAC CTGCTCGCCC TGTTGCGCCA GGGTGTCACC
CTGGACCCGG CCGCCCGCCA AGCCCTGGCC GAGCAATTCG ACGAGCCCGC CATGGCCAAT
GCCGACGTCG CCGAATGGGC GTGGCAGACA CACCTGGCTA CACAACCCGG CAGGCTGGAT
GCACTGCGCA GGACTATCCT GAACACGCGG CAGACGGATC TGGACCACCT GCTGAGCAAC
CTGCTCGACA CAGGTTCCAC TTGGCTATGC CTGGCCAACG CTGCCGCGCC AAACCCTTCC
TGGCAAGGCG CTGCACGATG A
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| Protein sequence | MPDATRHLTL ANGLQLTLRH APRLKRAAAA LRVHAGSHDA PGKWPGLAHF LEHLFFLGTP
RFPLDDGLMR YVQALGGQVN ASTRERTTDF FFEVPPNALA AGLERLCQML AEPDLGIARQ
RREREVIHAE FIAWSRNPQA QQQFALLQTL SPAHPLSAFH AGNRYTLALQ DPAFQQALGG
FHRRFYQGGQ IVLSLCGPQP LDELEQLGRQ HAQQFATGTR VPHLQPPPLS AATMPLAFIH
EHLPAGAEQA LELLIACLND SRPGTWLGTL RERGWLQGFK AEKLYAFAGQ LLWHLDLKLS
ANACPDEAND LLHGWFNFIR QADLAQLNRD FGLLQHSGER SASALELARR DSTGLPFSQL
DTQGLQALRA LLDDLPCSNH GQWQIPTVEP LLMADLPTAM AQPLPNALKI SDQLPGTRQY
AALYLRWHVP SPVRQRLQGV LEQALAPLQE RCERASVQLQ YTTAGEYWQL RCAGLPAAVL
RAVPQALALM LTPPASCWLP SAAPPPALIP IRALLKQLPD TVLHTPPTAA PAGTLKQQQL
DSLWQHANWH GLAAGFDDAA LNALATALQH CPGQGARPGS LPTWANRRWQ HAEVAGSEYA
LLLFCPLPPA SEAAGRLLAQ LLQGPVYQRL RVELQLGYAV FSAFRQVEGV GGLLFGVQSP
HTGQAQVLDH LLALLRQGVT LDPAARQALA EQFDEPAMAN ADVAEWAWQT HLATQPGRLD
ALRRTILNTR QTDLDHLLSN LLDTGSTWLC LANAAAPNPS WQGAAR
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