Gene PputGB1_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0405 
Symbol 
ID5868143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp472926 
End bp474086 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID641545485 
Productpyrroloquinoline quinone biosynthesis protein PqqE 
Protein accessionYP_001666652 
Protein GI167031421 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR02109] coenzyme PQQ biosynthesis protein E 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAACA CTGGATCGTC CTCGCCTGAG TTGCCGCCTA CGCCTGCGGT CGGCCTGCCG 
CTGTGGCTGC TGGCCGAGCT CACCTACCGC TGCCCGCTGC AGTGCCCGTA CTGTTCCAAC
CCGCTGGACT TCGCCGCCCA GGGCCAAGAG CTGAGCACCG AACAGTGGTT CAAGGTGATG
GCTGAAGCAC GGGAAATGGG CGCCGCGCAA ATCGGCTTCT CTGGCGGTGA ACCGCTGGTG
CGCCAGGACC TTGCCGAGCT GATTGGCGAG GCTCGCAGGC TGGGTTACTA CACCAACCTG
ATCACCTCGG GCATTGGCCT GACCGAGGCG CGCATCGCCG ACTTCAAGAA GGCCGGCCTG
GACCATATCC AGATCAGCTT CCAGGCCAGC GACGAGCAGG TGAACAACCT GCTGGCTGGC
TCGAAGAAGG CCTTTGCACA AAAGCTGGAA ATGGCCCGCG CGGTGAAAGC CCACGGCTAC
CCGATGGTGC TCAACTTCGT CACCCATCGG CACAACATCG ACAAGATCGA CCGCATCATC
GAGCTGTGCA TTGCCCTGGA GGCCGACTTC GTCGAGCTTG CCACCTGCCA GTTCTACGGC
TGGGCGCACC TCAACCGCCT GGGCCTGCTA CCGACTCGCG CGCAGCTCGA GCGGGCAGAA
CGCATCACCA ACGAATACCG GGACAAACTC AAGGCCGAGG GCAACCCGTG CAAGCTGATC
TTCGTTACCC CAGACTACTA CGAAGAACGC CCCAAGGCCT GCATGAATGG TTGGGGCAAC
CTGTTCCTCA CCATCACCCC GGACGGCACC GCCCTGCCCT GCCACGGCGC GCGCCAGCTG
CCGGTGCAAT TCCCCAATGT GCGCGAGCAT GACTTGCACC ATATCTGGTA CGAGTCGTTC
GGCTTCAATC GCTTCCGTGG TTATGAGTGG ATGCGCGAAC CGTGCCGCTC CTGCGACGAG
AAAGAAAAGG ACTTCGGCGG CTGTCGCTGC CAGGCCTTCA TGCTGACCGG CGATGCCAGC
AACGCCGACC CGGTATGCGC CAAGTCGGCC GACCACGGCA TCATCCTCAA GGCCCGCGAG
GAGGCAGAAA CCGCCCAGCT CGCCATTGAA CAGATGACCT TCCGCAATGA TCGAAACTCA
CGTGTCATCG CCCGCGGCTG A
 
Protein sequence
MPNTGSSSPE LPPTPAVGLP LWLLAELTYR CPLQCPYCSN PLDFAAQGQE LSTEQWFKVM 
AEAREMGAAQ IGFSGGEPLV RQDLAELIGE ARRLGYYTNL ITSGIGLTEA RIADFKKAGL
DHIQISFQAS DEQVNNLLAG SKKAFAQKLE MARAVKAHGY PMVLNFVTHR HNIDKIDRII
ELCIALEADF VELATCQFYG WAHLNRLGLL PTRAQLERAE RITNEYRDKL KAEGNPCKLI
FVTPDYYEER PKACMNGWGN LFLTITPDGT ALPCHGARQL PVQFPNVREH DLHHIWYESF
GFNRFRGYEW MREPCRSCDE KEKDFGGCRC QAFMLTGDAS NADPVCAKSA DHGIILKARE
EAETAQLAIE QMTFRNDRNS RVIARG