Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0405 |
Symbol | |
ID | 5868143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 472926 |
End bp | 474086 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545485 |
Product | pyrroloquinoline quinone biosynthesis protein PqqE |
Protein accession | YP_001666652 |
Protein GI | 167031421 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAACA CTGGATCGTC CTCGCCTGAG TTGCCGCCTA CGCCTGCGGT CGGCCTGCCG CTGTGGCTGC TGGCCGAGCT CACCTACCGC TGCCCGCTGC AGTGCCCGTA CTGTTCCAAC CCGCTGGACT TCGCCGCCCA GGGCCAAGAG CTGAGCACCG AACAGTGGTT CAAGGTGATG GCTGAAGCAC GGGAAATGGG CGCCGCGCAA ATCGGCTTCT CTGGCGGTGA ACCGCTGGTG CGCCAGGACC TTGCCGAGCT GATTGGCGAG GCTCGCAGGC TGGGTTACTA CACCAACCTG ATCACCTCGG GCATTGGCCT GACCGAGGCG CGCATCGCCG ACTTCAAGAA GGCCGGCCTG GACCATATCC AGATCAGCTT CCAGGCCAGC GACGAGCAGG TGAACAACCT GCTGGCTGGC TCGAAGAAGG CCTTTGCACA AAAGCTGGAA ATGGCCCGCG CGGTGAAAGC CCACGGCTAC CCGATGGTGC TCAACTTCGT CACCCATCGG CACAACATCG ACAAGATCGA CCGCATCATC GAGCTGTGCA TTGCCCTGGA GGCCGACTTC GTCGAGCTTG CCACCTGCCA GTTCTACGGC TGGGCGCACC TCAACCGCCT GGGCCTGCTA CCGACTCGCG CGCAGCTCGA GCGGGCAGAA CGCATCACCA ACGAATACCG GGACAAACTC AAGGCCGAGG GCAACCCGTG CAAGCTGATC TTCGTTACCC CAGACTACTA CGAAGAACGC CCCAAGGCCT GCATGAATGG TTGGGGCAAC CTGTTCCTCA CCATCACCCC GGACGGCACC GCCCTGCCCT GCCACGGCGC GCGCCAGCTG CCGGTGCAAT TCCCCAATGT GCGCGAGCAT GACTTGCACC ATATCTGGTA CGAGTCGTTC GGCTTCAATC GCTTCCGTGG TTATGAGTGG ATGCGCGAAC CGTGCCGCTC CTGCGACGAG AAAGAAAAGG ACTTCGGCGG CTGTCGCTGC CAGGCCTTCA TGCTGACCGG CGATGCCAGC AACGCCGACC CGGTATGCGC CAAGTCGGCC GACCACGGCA TCATCCTCAA GGCCCGCGAG GAGGCAGAAA CCGCCCAGCT CGCCATTGAA CAGATGACCT TCCGCAATGA TCGAAACTCA CGTGTCATCG CCCGCGGCTG A
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Protein sequence | MPNTGSSSPE LPPTPAVGLP LWLLAELTYR CPLQCPYCSN PLDFAAQGQE LSTEQWFKVM AEAREMGAAQ IGFSGGEPLV RQDLAELIGE ARRLGYYTNL ITSGIGLTEA RIADFKKAGL DHIQISFQAS DEQVNNLLAG SKKAFAQKLE MARAVKAHGY PMVLNFVTHR HNIDKIDRII ELCIALEADF VELATCQFYG WAHLNRLGLL PTRAQLERAE RITNEYRDKL KAEGNPCKLI FVTPDYYEER PKACMNGWGN LFLTITPDGT ALPCHGARQL PVQFPNVREH DLHHIWYESF GFNRFRGYEW MREPCRSCDE KEKDFGGCRC QAFMLTGDAS NADPVCAKSA DHGIILKARE EAETAQLAIE QMTFRNDRNS RVIARG
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