Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0389 |
Symbol | |
ID | 5868127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 454873 |
End bp | 455847 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545469 |
Product | serine/threonine protein kinase |
Protein accession | YP_001666636 |
Protein GI | 167031405 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.87305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.288216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCACC CCTTCGACAC CCTCACCCCC GACCTGGTCC TGGACGCCGT GGAAAGCCTG GGCTTCCTCA GCGATGCCCG CGTGTTGGCG CTGAACAGCT ACGAGAACCG CGTCTACCAG GTGGGCATCG AAGACGCGCA GCCGCTGATC GCCAAGTTCT ACCGCCCAGG CCGCTGGAGC GATGCGGCCA TTCTTGAGGA ACACAGCTTC ACCGCTGAAC TGGCCGACTG TGAAGTGCCG GTGGTTGCGC CGATGCAGCA CGACGGCCGC ACCCTGTTCG AACACCAGGG CTTCCGTTTC ACACTGTTCC CCCGCCGCGG CGGCCATGCC CCGGAGCCAG GCAACCTCGA TCAGCTTTAC CGCCTTGGCC AGTTGCTCGG CCGTCTGCAT GCCGTGGGTG CCAGCAGGCC ATTCGAGCAC CGTGAAGCCC TGGCTGTGGA CAACTTCGGC CACGCCTCGC TGAACACCCT GCTGGAAGGT GGTTTTGTCC CTCGCGAACT GTTGCCGGCC TTCGAGTCCG TGGCACGCGA CCTGCTCAAG CGGGTGGAGG ACATCTACGC CCGTACACCG CATCAGCTCA TCCGCCTGCA CGGCGACCTG CACCCCGGCA ACCTGATGCA CCGCGACGAG GTGTACCACG TGGTCGACCT CGACGATTGC CGCATGGGCC CGGCGGTACA AGACCTGTGG ATGATGCTGG CCGGCAACCG CGAGGAGCGC CTTGGGCAGC TGGCCGAGCT GATCGACGGC TACAACGAGT TCCACGACTT CGACCCGCGC GAACTGGCCT TGATCGAGCC CCTGCGCGCC CTGCGTCAGT TGCACTACAG CGCTTGGTTG GCAAGGCGCT GGGACGACCC GGCATTCCCA CCCAGCTTCC CGTGGTTCGG CCAGCCACGT TACTGGGGCG ACCAGATTCT TGCCCTGCGC GAGCAGATGG CCGCGTTGGA CGAACCACCG CTGAAGTTGT TCTAG
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Protein sequence | MSHPFDTLTP DLVLDAVESL GFLSDARVLA LNSYENRVYQ VGIEDAQPLI AKFYRPGRWS DAAILEEHSF TAELADCEVP VVAPMQHDGR TLFEHQGFRF TLFPRRGGHA PEPGNLDQLY RLGQLLGRLH AVGASRPFEH REALAVDNFG HASLNTLLEG GFVPRELLPA FESVARDLLK RVEDIYARTP HQLIRLHGDL HPGNLMHRDE VYHVVDLDDC RMGPAVQDLW MMLAGNREER LGQLAELIDG YNEFHDFDPR ELALIEPLRA LRQLHYSAWL ARRWDDPAFP PSFPWFGQPR YWGDQILALR EQMAALDEPP LKLF
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