Gene PputGB1_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0389 
Symbol 
ID5868127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp454873 
End bp455847 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID641545469 
Productserine/threonine protein kinase 
Protein accessionYP_001666636 
Protein GI167031405 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.87305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.288216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACC CCTTCGACAC CCTCACCCCC GACCTGGTCC TGGACGCCGT GGAAAGCCTG 
GGCTTCCTCA GCGATGCCCG CGTGTTGGCG CTGAACAGCT ACGAGAACCG CGTCTACCAG
GTGGGCATCG AAGACGCGCA GCCGCTGATC GCCAAGTTCT ACCGCCCAGG CCGCTGGAGC
GATGCGGCCA TTCTTGAGGA ACACAGCTTC ACCGCTGAAC TGGCCGACTG TGAAGTGCCG
GTGGTTGCGC CGATGCAGCA CGACGGCCGC ACCCTGTTCG AACACCAGGG CTTCCGTTTC
ACACTGTTCC CCCGCCGCGG CGGCCATGCC CCGGAGCCAG GCAACCTCGA TCAGCTTTAC
CGCCTTGGCC AGTTGCTCGG CCGTCTGCAT GCCGTGGGTG CCAGCAGGCC ATTCGAGCAC
CGTGAAGCCC TGGCTGTGGA CAACTTCGGC CACGCCTCGC TGAACACCCT GCTGGAAGGT
GGTTTTGTCC CTCGCGAACT GTTGCCGGCC TTCGAGTCCG TGGCACGCGA CCTGCTCAAG
CGGGTGGAGG ACATCTACGC CCGTACACCG CATCAGCTCA TCCGCCTGCA CGGCGACCTG
CACCCCGGCA ACCTGATGCA CCGCGACGAG GTGTACCACG TGGTCGACCT CGACGATTGC
CGCATGGGCC CGGCGGTACA AGACCTGTGG ATGATGCTGG CCGGCAACCG CGAGGAGCGC
CTTGGGCAGC TGGCCGAGCT GATCGACGGC TACAACGAGT TCCACGACTT CGACCCGCGC
GAACTGGCCT TGATCGAGCC CCTGCGCGCC CTGCGTCAGT TGCACTACAG CGCTTGGTTG
GCAAGGCGCT GGGACGACCC GGCATTCCCA CCCAGCTTCC CGTGGTTCGG CCAGCCACGT
TACTGGGGCG ACCAGATTCT TGCCCTGCGC GAGCAGATGG CCGCGTTGGA CGAACCACCG
CTGAAGTTGT TCTAG
 
Protein sequence
MSHPFDTLTP DLVLDAVESL GFLSDARVLA LNSYENRVYQ VGIEDAQPLI AKFYRPGRWS 
DAAILEEHSF TAELADCEVP VVAPMQHDGR TLFEHQGFRF TLFPRRGGHA PEPGNLDQLY
RLGQLLGRLH AVGASRPFEH REALAVDNFG HASLNTLLEG GFVPRELLPA FESVARDLLK
RVEDIYARTP HQLIRLHGDL HPGNLMHRDE VYHVVDLDDC RMGPAVQDLW MMLAGNREER
LGQLAELIDG YNEFHDFDPR ELALIEPLRA LRQLHYSAWL ARRWDDPAFP PSFPWFGQPR
YWGDQILALR EQMAALDEPP LKLF