| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0381 |
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| Symbol | |
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| ID | 5868119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 444274 |
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| End bp | 444984 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641545461 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001666628 |
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| Protein GI | 167031397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.738013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.331802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT TCGCCTGGCT GCGCCCCAGT GCGCCCGAGC TGGACTCCAT CACGCGCCAG
CGCCTGGCCC GACACGCCAA GCCGGCGCCC CTGGGTGTGT GCAGTTTGCG CGAGCAGCGC
TGGGTGGTGC TGGACCTGGA AACCAGCGGG CTCAACCCCA ACCGTGACCA GGTGCTGTCG
ATCGGGGCGG TGGCCATCGA GGACGGTGCC ATCGACTTTG CCCAGCAGTT CGAGCGCACC
TTGCACCGGC CGTTGCAGAA AACCAACGCC AGCGTGCTGA TCCACGGCTT GGGCCCCAGC
GCTCTGGCTG CCGGTTGCGA CCCAGCCGAG GCCTTGCTGG ATTTGCTCGA TTTCATGGGC
GACAGCCCGG TGCTGGCGTT TCACGCACCA TTCGACCAGC GCATGCTGGC ACGGGCGTTG
AAAGAAAGCC TTGGTCATCG CTTGCAATCT GTTTTTCTCG ACGTTGCCGA GCTTGCGCCG
ATGCTCAACC CCGACACGGT GTTGCGCGAA GCCGGGCTGG ATGACTGGGT GGCGCGCTTC
GGCTTGCAAG TGGAAGAGCG CCACCACGCC AGCGCCGATG CCCAGGTGAC TGCAGAGCTG
GCACTGATCC TGTTCAGCCA GGCCCGGCGC CAGCAGTTGG ACAGCCCGTT GCAGCTGGAA
CAGCGACTGC GCAGGTGGCG GCGGCGCAAC GTGCAAAGTC ACGGTTTGTA G
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| Protein sequence | MSLFAWLRPS APELDSITRQ RLARHAKPAP LGVCSLREQR WVVLDLETSG LNPNRDQVLS
IGAVAIEDGA IDFAQQFERT LHRPLQKTNA SVLIHGLGPS ALAAGCDPAE ALLDLLDFMG
DSPVLAFHAP FDQRMLARAL KESLGHRLQS VFLDVAELAP MLNPDTVLRE AGLDDWVARF
GLQVEERHHA SADAQVTAEL ALILFSQARR QQLDSPLQLE QRLRRWRRRN VQSHGL
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