Gene PputGB1_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0366 
Symbol 
ID5868104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp423855 
End bp425492 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content66% 
IMG OID641545446 
Productdihydrolipoamide acetyltransferase 
Protein accessionYP_001666613 
Protein GI167031382 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.106174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAC TCATTCGCGT ACCTGACATC GGCAGCGGTG AAGGTGAAAT CATCGAGCTG 
TTCGTCAAGG TCGGTGACCG TATCGAGGCT GACCAGAGCC TGCTGACCCT GGAGTCCGAC
AAGGCCTCCA TGGAAATCCC GGCCCCCAAG GCCGGCGTCA TCAAGGAACT GAAGGTCAAG
CTGGGCGATC GCCTGAAAGA AGGCGACGAG CTGCTGGTTC TGGAAGCCGA GGGCGCCGCT
GCTGCGGCCC CTGAGGCTCC GGCCGCTGCC GCTGCGCCGG CTGCTGCTCC AGCGCCTGCT
GCCGAAGCCG CCCCTGCTCC CGCCGCAGCT CCGGCTGCCG CCAGCGTGCA GGACATCCAC
GTGCCGGACA TCGGCTCGTC GGGCAAGGCC AAGATCATCG AAGTGCTGGT CAAGGTCGGC
GACACCGTCG AAGCCGACCA GTCGCTGATT ACCCTGGAGT CCGACAAGGC CTCCATGGAA
ATCCCGTCGC CGGCTGCCGG CGTGGTCGAA GAAGTCCTGT GCAAGCTGGA AGACGAAGTC
GGCACTGGCG ACCTGATCTT CAAGCTCAAG GTTGCTGGCG CTGCACCTGC TGCCGCTCCG
GCACCTGCCG CAGCTGCTGC CCCGGCCAAG GCTGAGGCTG CTCCGGCCGC CGCACCTGCC
GCTGCCGCCC CGGCTGCAGC CCCTGCACCG GCTGCTACCG CACCGGCCGC AGGCAGCAAC
GCCAAGGTTC ACGCAGGCCC GGCTGTTCGT CAGCTGGCCC GTGAATTCGG TGTCGACCTG
GGCGCAGTCG CGGCCACTGG CCCGCACGGC CGCATCCTGA AAGAAGACGT GCAGGTCTAC
GTCAAGGCGA TGATGCAGAA GGCCAAGGAA GCGCCGGCAG CTGCTGGTGC AACCGGCGGC
GCTGGCATCC CGCCGATCCC TGCCGTGGAC TTCAGCAAGT TCGGTGAAGT GGAAGAAGTG
GCCCTGACCC GCCTGATGCA GGTCGGTGCC GCCAACCTGC ACCGCAGCTG GCTGAACGTG
CCGCACGTGA CCCAGTTCGA CTCCGCCGAC ATCACCGAGC TGGAAGCCTT CCGCGTTGCG
CAGAAGGCCG TGGCCGAGAA GGCTGGCGTG AAGCTGACCG TGCTGCCACT GCTGCTCAAG
GCCTGCGCCT TCCTGCTCAA GGAACTGCCG GACTTCAACA GCTCGCTGGC GCCAAGCGGC
AAGGCCATCA TCCGCAAGAA GTACGTGAAC ATCGGCTTCG CCGTGGACAC CCCGGATGGT
CTGCTGGTCC CTGTGATCAA GAACGTCGAC CAGAAGAGCC TGCTGCAACT GGCCGCCGAA
GCCGCGGCGC TGGCTGAAAA AGCCCGCACC AAGAAGCTGT CGGCCGACGA GATGCAAGGC
GCTTGCTTCA CCATCTCCAG CCTCGGCCAC ATTGGCGGCA CCGGCTTCAC GCCGATCGTC
AACGCGCCGG AAGTGGCTAT CCTGGGCGTC TCCAAGGCGA CCATGCAGCC GGTCTGGGAT
GGCAAGGCGT TCCAGCCGAA GCTGATGCTG CCGCTGTCGC TGTCCTACGA TCACCGTGTG
ATCAACGGCG CTGCCGCTGC GCGCTTCACC AAGCGCCTGG GCGACGTGCT GGGCGATATC
CGCACCATGC TGCTGTAA
 
Protein sequence
MSELIRVPDI GSGEGEIIEL FVKVGDRIEA DQSLLTLESD KASMEIPAPK AGVIKELKVK 
LGDRLKEGDE LLVLEAEGAA AAAPEAPAAA AAPAAAPAPA AEAAPAPAAA PAAASVQDIH
VPDIGSSGKA KIIEVLVKVG DTVEADQSLI TLESDKASME IPSPAAGVVE EVLCKLEDEV
GTGDLIFKLK VAGAAPAAAP APAAAAAPAK AEAAPAAAPA AAAPAAAPAP AATAPAAGSN
AKVHAGPAVR QLAREFGVDL GAVAATGPHG RILKEDVQVY VKAMMQKAKE APAAAGATGG
AGIPPIPAVD FSKFGEVEEV ALTRLMQVGA ANLHRSWLNV PHVTQFDSAD ITELEAFRVA
QKAVAEKAGV KLTVLPLLLK ACAFLLKELP DFNSSLAPSG KAIIRKKYVN IGFAVDTPDG
LLVPVIKNVD QKSLLQLAAE AAALAEKART KKLSADEMQG ACFTISSLGH IGGTGFTPIV
NAPEVAILGV SKATMQPVWD GKAFQPKLML PLSLSYDHRV INGAAAARFT KRLGDVLGDI
RTMLL