Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0366 |
Symbol | |
ID | 5868104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 423855 |
End bp | 425492 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545446 |
Product | dihydrolipoamide acetyltransferase |
Protein accession | YP_001666613 |
Protein GI | 167031382 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.106174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAC TCATTCGCGT ACCTGACATC GGCAGCGGTG AAGGTGAAAT CATCGAGCTG TTCGTCAAGG TCGGTGACCG TATCGAGGCT GACCAGAGCC TGCTGACCCT GGAGTCCGAC AAGGCCTCCA TGGAAATCCC GGCCCCCAAG GCCGGCGTCA TCAAGGAACT GAAGGTCAAG CTGGGCGATC GCCTGAAAGA AGGCGACGAG CTGCTGGTTC TGGAAGCCGA GGGCGCCGCT GCTGCGGCCC CTGAGGCTCC GGCCGCTGCC GCTGCGCCGG CTGCTGCTCC AGCGCCTGCT GCCGAAGCCG CCCCTGCTCC CGCCGCAGCT CCGGCTGCCG CCAGCGTGCA GGACATCCAC GTGCCGGACA TCGGCTCGTC GGGCAAGGCC AAGATCATCG AAGTGCTGGT CAAGGTCGGC GACACCGTCG AAGCCGACCA GTCGCTGATT ACCCTGGAGT CCGACAAGGC CTCCATGGAA ATCCCGTCGC CGGCTGCCGG CGTGGTCGAA GAAGTCCTGT GCAAGCTGGA AGACGAAGTC GGCACTGGCG ACCTGATCTT CAAGCTCAAG GTTGCTGGCG CTGCACCTGC TGCCGCTCCG GCACCTGCCG CAGCTGCTGC CCCGGCCAAG GCTGAGGCTG CTCCGGCCGC CGCACCTGCC GCTGCCGCCC CGGCTGCAGC CCCTGCACCG GCTGCTACCG CACCGGCCGC AGGCAGCAAC GCCAAGGTTC ACGCAGGCCC GGCTGTTCGT CAGCTGGCCC GTGAATTCGG TGTCGACCTG GGCGCAGTCG CGGCCACTGG CCCGCACGGC CGCATCCTGA AAGAAGACGT GCAGGTCTAC GTCAAGGCGA TGATGCAGAA GGCCAAGGAA GCGCCGGCAG CTGCTGGTGC AACCGGCGGC GCTGGCATCC CGCCGATCCC TGCCGTGGAC TTCAGCAAGT TCGGTGAAGT GGAAGAAGTG GCCCTGACCC GCCTGATGCA GGTCGGTGCC GCCAACCTGC ACCGCAGCTG GCTGAACGTG CCGCACGTGA CCCAGTTCGA CTCCGCCGAC ATCACCGAGC TGGAAGCCTT CCGCGTTGCG CAGAAGGCCG TGGCCGAGAA GGCTGGCGTG AAGCTGACCG TGCTGCCACT GCTGCTCAAG GCCTGCGCCT TCCTGCTCAA GGAACTGCCG GACTTCAACA GCTCGCTGGC GCCAAGCGGC AAGGCCATCA TCCGCAAGAA GTACGTGAAC ATCGGCTTCG CCGTGGACAC CCCGGATGGT CTGCTGGTCC CTGTGATCAA GAACGTCGAC CAGAAGAGCC TGCTGCAACT GGCCGCCGAA GCCGCGGCGC TGGCTGAAAA AGCCCGCACC AAGAAGCTGT CGGCCGACGA GATGCAAGGC GCTTGCTTCA CCATCTCCAG CCTCGGCCAC ATTGGCGGCA CCGGCTTCAC GCCGATCGTC AACGCGCCGG AAGTGGCTAT CCTGGGCGTC TCCAAGGCGA CCATGCAGCC GGTCTGGGAT GGCAAGGCGT TCCAGCCGAA GCTGATGCTG CCGCTGTCGC TGTCCTACGA TCACCGTGTG ATCAACGGCG CTGCCGCTGC GCGCTTCACC AAGCGCCTGG GCGACGTGCT GGGCGATATC CGCACCATGC TGCTGTAA
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Protein sequence | MSELIRVPDI GSGEGEIIEL FVKVGDRIEA DQSLLTLESD KASMEIPAPK AGVIKELKVK LGDRLKEGDE LLVLEAEGAA AAAPEAPAAA AAPAAAPAPA AEAAPAPAAA PAAASVQDIH VPDIGSSGKA KIIEVLVKVG DTVEADQSLI TLESDKASME IPSPAAGVVE EVLCKLEDEV GTGDLIFKLK VAGAAPAAAP APAAAAAPAK AEAAPAAAPA AAAPAAAPAP AATAPAAGSN AKVHAGPAVR QLAREFGVDL GAVAATGPHG RILKEDVQVY VKAMMQKAKE APAAAGATGG AGIPPIPAVD FSKFGEVEEV ALTRLMQVGA ANLHRSWLNV PHVTQFDSAD ITELEAFRVA QKAVAEKAGV KLTVLPLLLK ACAFLLKELP DFNSSLAPSG KAIIRKKYVN IGFAVDTPDG LLVPVIKNVD QKSLLQLAAE AAALAEKART KKLSADEMQG ACFTISSLGH IGGTGFTPIV NAPEVAILGV SKATMQPVWD GKAFQPKLML PLSLSYDHRV INGAAAARFT KRLGDVLGDI RTMLL
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