Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0364 |
Symbol | |
ID | 5868102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 420058 |
End bp | 420726 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545444 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_001666611 |
Protein GI | 167031380 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.116305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCTGC GTTCGGAAAT CCTGGTGAAC AAAAACGTCA TGCCAACTGC GGAACAGGCC CTGCCTGGCC GCGAAACGCC AATGAGCCTG CCCGAGTTCC ACTACGTGTT CGAAGGCACC CCACTGCTCG GTCCATTCTT CGAAGGCGCC ATCGACTTCG CCATCTTCGG CCTGGGTTGC TTCTGGGGCG CCGAGCGCCG CTTCTGGCAG CGTGAAGGCG TGGTCAGCAC GGTGGTCGGT TACGCCGGCG GCTTCACCCC ACACCCCACC TACGAAGAAG TCTGCTCAGG CCTGACCGGC CACACCGAAG TGGTGCTGGT GGTGTTCGAC AAGGACAAAG TCAGCTACCG CGAGCTACTG GCAATGTTCT GGGAGCTGCA CAACCCGACC CAGGGCATGC GCCAGGGTAA CGACGTCGGC ACTCAGTACC GCTCGGCCAT CTACTGCACC AGCCCAGAAC AGCTGGAACA GGCCGAAGCC AGCCGCGACG CGTTCCAGGC CGAGCTGAGC AAGGCCGGCT TCGGCGAGAT CACCACCGAA ATCGACCAGG CACCCACCGT GTACTTCGCC GAGGCCTACC ACCAGCAGTA CCTGGCCAAG AACCCGCAGG GCTACTGCGG CATTGGCGGC ACCGGCGTTT GCCTGCCACC CAGCCTGCAG GGCAACTGA
|
Protein sequence | MVLRSEILVN KNVMPTAEQA LPGRETPMSL PEFHYVFEGT PLLGPFFEGA IDFAIFGLGC FWGAERRFWQ REGVVSTVVG YAGGFTPHPT YEEVCSGLTG HTEVVLVVFD KDKVSYRELL AMFWELHNPT QGMRQGNDVG TQYRSAIYCT SPEQLEQAEA SRDAFQAELS KAGFGEITTE IDQAPTVYFA EAYHQQYLAK NPQGYCGIGG TGVCLPPSLQ GN
|
| |