| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0351 |
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| Symbol | |
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| ID | 5868091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 407643 |
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| End bp | 408842 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545433 |
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| Product | formaldehyde dehydrogenase, glutathione-independent |
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| Protein accession | YP_001666600 |
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| Protein GI | 167031369 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0853836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.45592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCA ATCGTGGAGT GGTATATCTC GGCGCCGGCA AGGTCGAAGT GCAGAAGATC
GACTACCCGA AAATGCAGGA CCCGCGCGGC AAGAAGATCG AACACGGCGT CATCCTCAAG
GTGGTCTCCA CCAACATCTG CGGCTCCGAC CAGCACATGG TCCGTGGCCG TACCACTGCC
CAGGTCGGCC TGGTTCTGGG CCATGAAATC ACTGGTGAAA TCGTCGAGAA GGGCAGCGAC
GTCGAGCGCA TGCAGATCGG TGACCTGGTA TCGGTACCGT TCAACGTCGC CTGTGGCCGC
TGCCGCTCGT GCAAAGAGAT GCACACCGGT GTTTGCCTCA CCGTTAACCC AGCCCGTGCT
GGTGGTGCCT ACGGCTATGT CGACATGGGC GACTGGACTG GCGGCCAGGC TGAATACGTG
CTGGTGCCTT ACGCCGACTT CAACCTGCTG AAACTGCCAG AGCGCGACAA GGCCATGGAA
AAGATCCGTG ACCTGACTTG CCTCTCCGAC ATCCTGCCAA CCGGCTACCA CGGTGCCGTG
ACTGCTGGCG TAGGCCCAGG CAGCACCGTT TACGTCGCGG GCGCTGGGCC AGTCGGCCTG
GCCGCCGCTG CCTCGGCCCG CCTGCTGGGC GCTGCCTGCG TGATCGTGGG CGACCTGAAC
CCTGCCCGCC TGGCCCACGC CAAGTCCCAG GGCTTCGAGG TGGTCGACCT GTCCAAGGAC
ACCCCGCTGC ATGAGCAGAT CGTCGACATC CTCGGTGAGC CAGAAGTGGA CTGCGCCGTT
GACGCCGTTG GCTTCGAAGC CCGTGGCCAT GGTCACGAAG GTGCCAAGCA TGAAGCCCCG
GCCACTGTAC TGAACTCGCT GATGCAGGTG ACCCGCGTTG CCGGCAGCAT CGGTATTCCA
GGCCTGTACG TGACCGAAGA CCCGGGTGCG GTGGATGCCG CCGCCAAGAT CGGCGCACTG
AGCATCCGCT TCGGCCTGGG CTGGGCGAAG TCGCACAGCT TCCACACCGG CCAGACCCCG
ACCATGAAGT ACAACCGCCA GCTGATGCAG GCGATCATGT GGGATCGGAT CAATATTGCT
GAGGTGGTGG GTGTGCAGGT GATCAACCTG GATCAGGCGC CAGAAGGGTA TGGCGAGTTT
GATGCGGGTG TGCCGAAGAA GTTTGTAATT GACCCGCACA AGATGTGGGG TGCGGCTTAA
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| Protein sequence | MSGNRGVVYL GAGKVEVQKI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA
QVGLVLGHEI TGEIVEKGSD VERMQIGDLV SVPFNVACGR CRSCKEMHTG VCLTVNPARA
GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPERDKAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AACVIVGDLN PARLAHAKSQ GFEVVDLSKD
TPLHEQIVDI LGEPEVDCAV DAVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGSIGIP
GLYVTEDPGA VDAAAKIGAL SIRFGLGWAK SHSFHTGQTP TMKYNRQLMQ AIMWDRINIA
EVVGVQVINL DQAPEGYGEF DAGVPKKFVI DPHKMWGAA
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