| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0338 |
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| Symbol | |
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| ID | 5868078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 390982 |
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| End bp | 392274 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545420 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001666587 |
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| Protein GI | 167031356 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000696422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCA CCGCAACCCT GAGCCTGGGC GATCCACTGG AACCTGCACG CAAGGCCACC
GCCGAGATGC TGCAGACCCG CGAGCGAACC TACTCGCTGC CCCAGCCTTT CTACACCGAC
GAGCGTCTGT TCCAGATCGA CATGCAGGAG ATCTTCCAGA AAGAATGGCT GATCGCCGGC
ATGACTTGCG AAATTCCGGC AAAAGGCAAC TACATCACGC TGCAGATCGG CAACAACCCG
ATTCTGGTGG TGCGTGGCGC CGAAGGTAAG GTGCACGCCT TCCATAACGT CTGCCGGCAC
CGCGGTTCGC GCTTGTGCGT CAGCGACAAA GGCAAAGTGG CCAAGTTGGT CTGCCATTAC
CACCAGTGGA CATATGAACT GGACGGCCGC CTGCTGTTCG CGGGCACCGA GATGGGCGCC
GACTTCGACA TGAAGCAGTA CGGTCTGAAG CCTGTGAACG TGAAGGTCGC TGGTGGCTAC
ATCTTCATCA GCCTGGCGGA AAACCCACCC GCCATCGACG AGTTCCTGGC CACCCTGGAA
CACTACATGG AACCCTACGA CATGGAGAAC ACCAAGGTGG CGGTGCAAAC CACCTTGATG
GAAAAAGCCA ACTGGAAGCT GGTGCTGGAA AACAACCGCG AGTGCTACCA CTGCAGCGGC
TCGCACCCGG AGCTGCTGCA AACCCTGCTG GAGTGGGACG ACACCAACGA CCCGCGCGCC
AGCCAGGAAT TCAAGGACCA CGTGGCCGCC TCCGCCGCCG CCTGGGAAGC CGAAAAGATC
CCGTACCTGC ACAAGAGCCA CGGCCTGCGT AACCGTATCG TACGCATGCC TCTGCTCAAG
GGCACCGTGT CGATGACCAT GGACGGCAAG CAGGCCTGCC AGAAGCTGAT GGGCCGCATC
AAGAACCCGG ACCTGGGCTC GATGCGTATC CTGCACCTGC CGCACTCCTG GAACCACTGC
ATGGGCGACC ACATGATCGT GTTCACCGTG TGGCCGATCA GCGCCCAGGA GACCATGGTC
ACCACCAAAT GGCTGGTGCA CAAGGACGCC GTGGAAGGGG TGGACTACGA CCCTGAGCGC
ATGCGCAAGG TGTGGGACGC CACCAACGAC CAGGACCGCC GCCTGGCCGA AGAGAACCAG
CGCGGGATCA ACTCCACGGC TTACCAGCCA GGGCCGTACT CGAAAACCTA CGAGTTTGGC
GTGGTGAACT TCATCGACTG GTACAGCGGG CGGATGCTGA ACAACCTGGG GGCGGAGCCG
GCGGCGTATC TGAAAGAAGT GCAGGCACAG TAA
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| Protein sequence | MDVTATLSLG DPLEPARKAT AEMLQTRERT YSLPQPFYTD ERLFQIDMQE IFQKEWLIAG
MTCEIPAKGN YITLQIGNNP ILVVRGAEGK VHAFHNVCRH RGSRLCVSDK GKVAKLVCHY
HQWTYELDGR LLFAGTEMGA DFDMKQYGLK PVNVKVAGGY IFISLAENPP AIDEFLATLE
HYMEPYDMEN TKVAVQTTLM EKANWKLVLE NNRECYHCSG SHPELLQTLL EWDDTNDPRA
SQEFKDHVAA SAAAWEAEKI PYLHKSHGLR NRIVRMPLLK GTVSMTMDGK QACQKLMGRI
KNPDLGSMRI LHLPHSWNHC MGDHMIVFTV WPISAQETMV TTKWLVHKDA VEGVDYDPER
MRKVWDATND QDRRLAEENQ RGINSTAYQP GPYSKTYEFG VVNFIDWYSG RMLNNLGAEP
AAYLKEVQAQ
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