| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0318 |
|---|
| Symbol | |
|---|
| ID | 5868058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 368236 |
|---|
| End bp | 369006 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641545400 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001666567 |
|---|
| Protein GI | 167031336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG CCAAGCGCAT CATCCCTTGC CTGGACGTGG ACAACGGCCG GGTGGTCAAG
GGCGTCAAGT TCGAGAACAT CCGTGATGCC GGCGACCCGG TGGAAATCGC CCGTCGGTAC
AACGAGCAGG GTGCCGACGA AATCACTTTC CTCGACATCA CCGCCAGCGT CGATGGCCGC
GACACTACCC TGCATACCGT CGAGCGCATG GCCAGCCAGG TGTTCATCCC GCTGACCGTG
GGCGGTGGCG TGCGTACCGT GCAGGACATC CGTAACCTGC TCAACGCCGG TGCCGACAAG
GTTTCGATCA ACACGGCTGC GGTGTTCAAC CCGGAGTTCG TGGGCGAGGC TGCGGACCGT
TTCGGTTCGC AGTGCATCGT TGTCGCCATC GATGCCAAGA AAGTGTCCGG GCCGGGTGAA
ACGCCGCGCT GGGAGATTTT CACCCACGGT GGGCGCAAGC CGACTGGCCT GGATGCAGTG
GAGTGGGCGA AGAAGATGGA AGGCCTGGGT GCAGGCGAGA TTCTGCTCAC CAGCATGGAC
CAGGACGGCA TGAAGAACGG CTTCGACCTG GGCGTTACCC GTGCCATCAG TGATGCGCTG
GGTATTCCGG TGATTGCCTC GGGTGGTGTG GGCAACCTGC AGCACCTGGC TGACGGTATT
CTGGAAGGGC ATGCCAGCGC GGTGCTGGCG GCCAGTATCT TCCACTTTGG CGAGTACACG
GTACCGGAAG CCAAGGCCTA CATGGCTTCG CGCGGGATCG TCGTTCGCTG A
|
|---|
| Protein sequence | MALAKRIIPC LDVDNGRVVK GVKFENIRDA GDPVEIARRY NEQGADEITF LDITASVDGR
DTTLHTVERM ASQVFIPLTV GGGVRTVQDI RNLLNAGADK VSINTAAVFN PEFVGEAADR
FGSQCIVVAI DAKKVSGPGE TPRWEIFTHG GRKPTGLDAV EWAKKMEGLG AGEILLTSMD
QDGMKNGFDL GVTRAISDAL GIPVIASGGV GNLQHLADGI LEGHASAVLA ASIFHFGEYT
VPEAKAYMAS RGIVVR
|
|---|
| |