| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0317 |
|---|
| Symbol | |
|---|
| ID | 5868057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 367488 |
|---|
| End bp | 368225 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545399 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_001666566 |
|---|
| Protein GI | 167031335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTA TCCCCGCTAT CGATCTGAAG GACGGTGCCT GCGTGCGCCT GCGCCAGGGC
CGCATGGAAG ACTCCACGGT ATTTTCCGAC GACCCGGTGA GCATGGCCGC CAAGTGGGTC
GAGGGTGGCT GCCGCCGCCT GCACCTGGTC GACCTCAACG GCGCTTTCGA AGGCCAACCG
GTCAACGGTG AAGTGGTTAC CGCCATTGCC AAACGTTACC CGACTCTGCC GATCCAGATC
GGCGGCGGTA TCCGTTCGCT GGATACCATC GAGCACTACG TCAAGGCTGG CGTCAGCTAC
GTGATCATCG GCACCAAGGC GGTCAAGCAG CCCGAGTTCG TCGCCGAAGC GTGCAAGGCC
TTCCCAGGCA AGGTCATCGT TGGCCTGGAT GCCAAGGACG GCTTCGTCGC CACCGACGGC
TGGGCCGAAG TCAGCTCGGT GCAGGTCATC GACCTGGCCA AGCGTTTCGA GGCCGATGGC
GTCTCGGCGA TCGTCTACAC CGACATCGCC AAGGACGGCA TGATGCAGGG CTGCAACGTG
CCGTTCACCA AGGCGCTGGC CGAAGCCACC CGCATTCCGG TGATCGCGTC TGGCGGCATT
CACAACCTGG GCGACATCAA GGCCCTGCTC GACGCCAAGG CGCCAGGCAT TGTCGGCGCC
ATCACAGGCC GTGCCATCTA CGAAGGCACG CTCGATGTCG CCGAGGCCCA GGCCTTCTGC
GACAACTACC AAGGCTGA
|
|---|
| Protein sequence | MLIIPAIDLK DGACVRLRQG RMEDSTVFSD DPVSMAAKWV EGGCRRLHLV DLNGAFEGQP
VNGEVVTAIA KRYPTLPIQI GGGIRSLDTI EHYVKAGVSY VIIGTKAVKQ PEFVAEACKA
FPGKVIVGLD AKDGFVATDG WAEVSSVQVI DLAKRFEADG VSAIVYTDIA KDGMMQGCNV
PFTKALAEAT RIPVIASGGI HNLGDIKALL DAKAPGIVGA ITGRAIYEGT LDVAEAQAFC
DNYQG
|
|---|
| |