| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0307 |
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| Symbol | |
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| ID | 5868046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 356966 |
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| End bp | 358351 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545388 |
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| Product | GABA permease |
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| Protein accession | YP_001666556 |
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| Protein GI | 167031325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.220085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTA ACAATTCCAA TGACCTCGCT CAGGGGCTCA AACAACGGCA TGTGACCATG
CTGTCCATCG CTGGCGTCAT CGGTGCCGGC CTGTTCGTAG GCTCCGGCCA CGCCATCGCA
GCTGCCGGCC CTGCCGTGCT GCTGGCATAT GCCGCCGCCG GTACCCTGGT GGTGCTGGTG
ATGCGCATGT TGGGTGAAAT GGCTGTCGCC TCGCCTGACA CCGGTTCGTT CTCCACATAT
GCCGACCGCG CCATCGGGCG CTGGGCCGGT TTCACCATTG GCTGGCTGTA CTGGTGGTTC
TGGGTGCTGG TGATACCGCT GGAGGCCAAT GCCGCCGCAG CCATCCTGCA TGCGTGGTTC
CCTGCGGTCG ACCTGTGGGC ATTCTCCCTC ATCATTACCT TGGCGCTGAC GCTGACCAAC
CTGTGCAGCG TTAAGAACTA CGGTGAGTTC GAGTTCTGGT TCGCCCTGCT CAAGGTGCTG
GCGATCATCG GCTTCATCGC CGTGGGCTGT GCTGCCTTGT TCGGCTTCGT GCCAAACAGT
CAGGTGAGCG GTGCCAGCCA CCTGTTCGAT ACCCAAGGTT TCATGCCGAA CGGCCTGGGC
GCCGTGCTGG CCGCGATGCT GACCACCATG TTCTCGTTCA TGGGTACTGA AATCGTCACC
ATCGCCGCTG CCGAGTCGAA GGACCCGGGC AAGCAGATCA GCCGTGCCAC CAATTCGGTG
ATCTGGCGTA TCTGCCTGTT CTACCTGGTG TCGATCTTCC TGGTCGTGGC CTTGGTGCCT
TGGAACGACC CAGCGCTGGC CGAAACCGGT TCCTACCAGA CCGTGCTGAG CCGTATCGGC
GTACCGAATG CCAAGCTGAT CGTCGACATC GTGGTGTTGA TCGCGGTGAC CAGCTGCCTG
AACTCGGCGC TGTACACTTC GTCGCGCATG CTGTTCTCGC TGAGCAAGCG TGGCGACGCA
CCGGCCATCG CCCAGCGCAC CACCAAGGCG GCTACCCCGC ACGTGGCGGT TTTGCTGTCC
ACGGCAGCGG CGTTCCTTTG CGTGTTCGCC AACTTCGTGG CCCCGGCCCA GGTGTTCGAG
TTCCTGCTGG CCAGTTCGGG CGCCATTGCG CTGCTGGTGT ACCTGGTGAT TGCCGTGTCG
CAGTTGCGCA TGCGTGCCCA GCGTGAAGCC CGCGGCGAGA AAATCACATT CAAGATGTGG
CTGTTCCCGG GCCTGACCTG GGCGACCATT GCCTTCATCG TTGCCATTTT GGTGGTAATG
GCGTTGCGTG AAGATCACCG CGCCGAAATC ATCGCGACTG CGCTGCTGAG TATTGGTGTG
GTGGCAGCTG GCTTGCTGGT GCACCGCAAG CGTGAGGCTG CCGGACGGGT GGCGCTGGAT
AACTGA
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| Protein sequence | MSGNNSNDLA QGLKQRHVTM LSIAGVIGAG LFVGSGHAIA AAGPAVLLAY AAAGTLVVLV
MRMLGEMAVA SPDTGSFSTY ADRAIGRWAG FTIGWLYWWF WVLVIPLEAN AAAAILHAWF
PAVDLWAFSL IITLALTLTN LCSVKNYGEF EFWFALLKVL AIIGFIAVGC AALFGFVPNS
QVSGASHLFD TQGFMPNGLG AVLAAMLTTM FSFMGTEIVT IAAAESKDPG KQISRATNSV
IWRICLFYLV SIFLVVALVP WNDPALAETG SYQTVLSRIG VPNAKLIVDI VVLIAVTSCL
NSALYTSSRM LFSLSKRGDA PAIAQRTTKA ATPHVAVLLS TAAAFLCVFA NFVAPAQVFE
FLLASSGAIA LLVYLVIAVS QLRMRAQREA RGEKITFKMW LFPGLTWATI AFIVAILVVM
ALREDHRAEI IATALLSIGV VAAGLLVHRK REAAGRVALD N
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