| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0303 |
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| Symbol | |
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| ID | 5868042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 353351 |
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| End bp | 354040 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545384 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001666552 |
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| Protein GI | 167031321 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000177039 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGG AAGTCATCTT CAAATGGCTG CCACGCCTGG CCGAAGGCGC AACCCTTACC
CTGGAGCTGG TGGCCATTGC CGTGGTTGCC GGGTTGATCC TGGCCATCCC GCTGGGCATC
GCCCGCTCCT CACGCCATTG GTACGTGCGT GCGGTGCCGT TCAGCTACAT CTTCTTCTTC
CGTGGTACGC CACTGTTGGT GCAGCTGTTC CTGGTCTACT ACGGCCTGGC GCAGTTCGAT
GCCGTGCGCT CCAGCTCGCT GTGGCCGTAC CTGCGCGATC CGTTCTGGTG CACGGTGCTG
ACCATGACCC TGCACACCGC CGCGTACATC GCCGAGATCC TGCGTGGCGC GCTGCAGTCG
ATCCCCAAGG GCGAGATCGA AGCGGCACGC GCGCTGGGCA TGTCACGGGG CAAGGCACTG
TTCTACATCA TGCTGCCACG TGCTGCGCGC ATCGGCCTGC CGGCGTACAG CAACGAAGTG
ATCCTGATGC TCAAGGCCAG CGCCCTGGCC AGTACCGTGA CCCTGCTGGA ACTGACCGGC
ATGGCCCGTA CCATCATTGC GCGGACCTAC CTGCCGGTGG AAATCTTCTT CGCGGCCGGG
GTGTTCTACC TGGTGATCTC GTTCTTGCTG GTGCAGGGCT TCAAGCTGCT GGAGCGCTGG
TTGCGCGTGG ATGCCTGCCA AGGCCGCTGA
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| Protein sequence | MNWEVIFKWL PRLAEGATLT LELVAIAVVA GLILAIPLGI ARSSRHWYVR AVPFSYIFFF
RGTPLLVQLF LVYYGLAQFD AVRSSSLWPY LRDPFWCTVL TMTLHTAAYI AEILRGALQS
IPKGEIEAAR ALGMSRGKAL FYIMLPRAAR IGLPAYSNEV ILMLKASALA STVTLLELTG
MARTIIARTY LPVEIFFAAG VFYLVISFLL VQGFKLLERW LRVDACQGR
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