Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0302 |
Symbol | |
ID | 5868000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 352081 |
End bp | 353286 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545383 |
Product | hypothetical protein |
Protein accession | YP_001666551 |
Protein GI | 167031320 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000220682 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGTC ACCTCCACAG CCATCACCTA AGCACCCGCT TCCAGGCACT CGACCAGTTC CTGATCGAGC ACCAACAGCT GTGGAAACCC CGCCCCTTCA CTACCCTGCA CCTGGGCTGG GAAACCACCC ACCCCGAACT GGCCACCCAC CTGCGCCAAT GCTCCCTGGC AGACGCCGAA GCCGATAGTA CCGCTGACCA CTTGCCCGCC CCATTCCCGC AACTGGCCCA GCAAGCCCAG CAGCTCTCCA CCCTTGGCAG CCTCCCTCAG AGCGCTCTAC CCTCCGCCGC CCACCGCCTG GACGTTGCTG TCCCCGGCCG CAAATGGCAG CAGATCGAAG CCTTCGCCAG CCACCTGGCC TTCCGTGAAC CGCCGCAACA CTGGCTGGAC TGGTGCTCCG GCAAAGGCCA CCTGGGCCGC CGCCTGTTGC AACCCGGCCA GCAACTGACC TGCCTTGAGT ACGACGCCGA CCTGGTCGCC GCCGGCCAGG CCCTGAGCGC GCACCACCAC GTGCCAGCGC AGCATGTGCA CCAGGATGTG ATGGCCAGCG ACAGCGTCCG CCACCTGGCA GGCGACAAGA GCGTGGTCGC CCTGCACGCC TGTGGCGACC TGCATGTACG CCTGATGCAA CTGGCCAGCC GGCAAGGTTG CCGGCAGTTG GCCGTAGCCC CCTGCTGCTA CAACCGCACA GCCGTGCAGC AATACCAGGC GTTATCCACA GCCGCGCAAG CGTCCAACTT GCAGCTGTCG CTGGACGACC TGGGCCTGCC CTTGAGCGAA ACCGTCACCG CTGGCGCCCG CGTGCGGCGC CAGCGCGACA CCTCGATGGC CCGGCGCCTG GGCTTCGACC TGCTACAACG CCAGCAGCGC CAGAGCAGCG AATACCTGCC GACGCCGTCG CTGCCGGTAG CCTGGCTGGA AAAGCCTTTC GAGCACTACT GCCGCGACCT GGCAGATCTG AAACAACTGC CTTTGCACGG CAACCCGGAT TGGGCCGCCC TGGAGGCCGC GGGCTGGCAG CGCCTGGCCG AGGTACGCAA CCTGGAGCGC GTGCGCAACC TATTCCGCCG GCCGCTGGAA CTATGGCTGG TGCTCGATCG CGCCCTGTTT CTCGAAGAAC AAGGCTATGA GGTGCGCCTT GGCCTGTTTT GCGACTACCC ACTGACCCCG CGCAACCTGC TCATCCTTGC GGAACGCGAC CGTTAG
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Protein sequence | MPSHLHSHHL STRFQALDQF LIEHQQLWKP RPFTTLHLGW ETTHPELATH LRQCSLADAE ADSTADHLPA PFPQLAQQAQ QLSTLGSLPQ SALPSAAHRL DVAVPGRKWQ QIEAFASHLA FREPPQHWLD WCSGKGHLGR RLLQPGQQLT CLEYDADLVA AGQALSAHHH VPAQHVHQDV MASDSVRHLA GDKSVVALHA CGDLHVRLMQ LASRQGCRQL AVAPCCYNRT AVQQYQALST AAQASNLQLS LDDLGLPLSE TVTAGARVRR QRDTSMARRL GFDLLQRQQR QSSEYLPTPS LPVAWLEKPF EHYCRDLADL KQLPLHGNPD WAALEAAGWQ RLAEVRNLER VRNLFRRPLE LWLVLDRALF LEEQGYEVRL GLFCDYPLTP RNLLILAERD R
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