Gene PputGB1_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0302 
Symbol 
ID5868000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp352081 
End bp353286 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID641545383 
Producthypothetical protein 
Protein accessionYP_001666551 
Protein GI167031320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000220682 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGTC ACCTCCACAG CCATCACCTA AGCACCCGCT TCCAGGCACT CGACCAGTTC 
CTGATCGAGC ACCAACAGCT GTGGAAACCC CGCCCCTTCA CTACCCTGCA CCTGGGCTGG
GAAACCACCC ACCCCGAACT GGCCACCCAC CTGCGCCAAT GCTCCCTGGC AGACGCCGAA
GCCGATAGTA CCGCTGACCA CTTGCCCGCC CCATTCCCGC AACTGGCCCA GCAAGCCCAG
CAGCTCTCCA CCCTTGGCAG CCTCCCTCAG AGCGCTCTAC CCTCCGCCGC CCACCGCCTG
GACGTTGCTG TCCCCGGCCG CAAATGGCAG CAGATCGAAG CCTTCGCCAG CCACCTGGCC
TTCCGTGAAC CGCCGCAACA CTGGCTGGAC TGGTGCTCCG GCAAAGGCCA CCTGGGCCGC
CGCCTGTTGC AACCCGGCCA GCAACTGACC TGCCTTGAGT ACGACGCCGA CCTGGTCGCC
GCCGGCCAGG CCCTGAGCGC GCACCACCAC GTGCCAGCGC AGCATGTGCA CCAGGATGTG
ATGGCCAGCG ACAGCGTCCG CCACCTGGCA GGCGACAAGA GCGTGGTCGC CCTGCACGCC
TGTGGCGACC TGCATGTACG CCTGATGCAA CTGGCCAGCC GGCAAGGTTG CCGGCAGTTG
GCCGTAGCCC CCTGCTGCTA CAACCGCACA GCCGTGCAGC AATACCAGGC GTTATCCACA
GCCGCGCAAG CGTCCAACTT GCAGCTGTCG CTGGACGACC TGGGCCTGCC CTTGAGCGAA
ACCGTCACCG CTGGCGCCCG CGTGCGGCGC CAGCGCGACA CCTCGATGGC CCGGCGCCTG
GGCTTCGACC TGCTACAACG CCAGCAGCGC CAGAGCAGCG AATACCTGCC GACGCCGTCG
CTGCCGGTAG CCTGGCTGGA AAAGCCTTTC GAGCACTACT GCCGCGACCT GGCAGATCTG
AAACAACTGC CTTTGCACGG CAACCCGGAT TGGGCCGCCC TGGAGGCCGC GGGCTGGCAG
CGCCTGGCCG AGGTACGCAA CCTGGAGCGC GTGCGCAACC TATTCCGCCG GCCGCTGGAA
CTATGGCTGG TGCTCGATCG CGCCCTGTTT CTCGAAGAAC AAGGCTATGA GGTGCGCCTT
GGCCTGTTTT GCGACTACCC ACTGACCCCG CGCAACCTGC TCATCCTTGC GGAACGCGAC
CGTTAG
 
Protein sequence
MPSHLHSHHL STRFQALDQF LIEHQQLWKP RPFTTLHLGW ETTHPELATH LRQCSLADAE 
ADSTADHLPA PFPQLAQQAQ QLSTLGSLPQ SALPSAAHRL DVAVPGRKWQ QIEAFASHLA
FREPPQHWLD WCSGKGHLGR RLLQPGQQLT CLEYDADLVA AGQALSAHHH VPAQHVHQDV
MASDSVRHLA GDKSVVALHA CGDLHVRLMQ LASRQGCRQL AVAPCCYNRT AVQQYQALST
AAQASNLQLS LDDLGLPLSE TVTAGARVRR QRDTSMARRL GFDLLQRQQR QSSEYLPTPS
LPVAWLEKPF EHYCRDLADL KQLPLHGNPD WAALEAAGWQ RLAEVRNLER VRNLFRRPLE
LWLVLDRALF LEEQGYEVRL GLFCDYPLTP RNLLILAERD R