Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0296 |
Symbol | |
ID | 5867993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 346231 |
End bp | 347598 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545376 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001666545 |
Protein GI | 167031314 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGC TTCGCCGGCT GTGGCCACGC ACCTTGTTTG GTCAGTTGCT GCTGATCATG GTCAGCGGCA CGCTGGTGAT TCAGTTGATG TCGAGCAGCA TCTGGTTCGA TGTGCGTTTC GCCCAGGTGC TCGAGGCGCC CGTACGGCTG GTCGCTGCGC GCAGCGCTCC ACTGATTGCC CAGGCCGACT GCCACGGCGG CATGCTGCAG CCGCCAGCCC ATTACCAGCT ACGCTGCGCC GAAAGTCTGC CCACGCCGGA GCATGACGAG CGCCGCGGGC GCAGGCGCAT CGAGCTGTTG CTGCAGCAGG CCCTCAAGTA CGAGCTGGGG CATGCCCAGG ACGTGCGCCT GATGAAGGTG CAACTGACCG ATGAACTGGG CCAGCCGATC GTCTGGCGCA GCTTGTTCGG CCTGCGCACG GCCCAGGCGC ATATCCAGTT CGCGGTGCCG TTGGCCGATG GTCACTGGCT GACCGTCGAT GGCCAGGAAC TGCAGGGTTG GAGCGGCGAG TCGGCTTGGG TGCTGATCAG CGACTACCTG TTGCGGGTGT ACGCCCTGCG GATTGTCGCG GTATTGCTGG TATGCCTGAT TGCCGTGCGC CTGTGCCTGC GCCCGCTGCG TCGCCTGGCT GATGCCGCAC GCGGCCTGGG CGCTAACCTC GAGCAACCGC CCTTGGCGCT GGATGGCCCG GAGGAAGTGC GTCAGGCGGC GCAAGCGTTC AACGCCATGC AGCAGCGGCT GATAGCCATG GTCAACGACA AAGCCTACTT CCTGGCTGCC GTATCACACG ACCTGCGCAC ACCACTGACC CGAATGCGCC TGCGCCTGGA GCGCCTGCCC GACGACGAAC ACCGCCAACG CCTGCGGCAG AACATCACAC AGATGGACGA CATGATCGGC CAGGTCCTCG ATTACCTGCG TGCGGGGGAA CAGCAGAATT TGCAGCAGGT GGACCTGGAC CGGCTGGTGG CGCGCCAGTG TGCGGACCTG GCCTGCGCCG AGGAACCACT GCCAGTACAC GGCCAGGCAG GCAGCTTGCG GGTGGATGCC CTGCTGTTGC AGCGTTGCCT GCAAAATTTG TTGGTGAATG CGTTGCGCTA TGCCCAAGAC ATTTCGGTCA CGCTGGAGCG AGCGAGCACA GGGGTATTCA TCCATATCGA CGACCGTGGG CCGGGGATCG CGCCCGCGCT GCTGACGACC ATTACCGACC CGTTCGTGCG CGGCGAAGGC TCGCGTAACC AGGCCTCGGG AGGGTATGGG CTGGGGTTGA GCATTGCCCA GCGGATTGCA ACCAGCCATG GCGGTGAGCT GATGCTGTCG AACCGTGAGG GCGGTGGATT GCGGGTCAGC ATACTGCTCC CCATCTGA
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Protein sequence | MRWLRRLWPR TLFGQLLLIM VSGTLVIQLM SSSIWFDVRF AQVLEAPVRL VAARSAPLIA QADCHGGMLQ PPAHYQLRCA ESLPTPEHDE RRGRRRIELL LQQALKYELG HAQDVRLMKV QLTDELGQPI VWRSLFGLRT AQAHIQFAVP LADGHWLTVD GQELQGWSGE SAWVLISDYL LRVYALRIVA VLLVCLIAVR LCLRPLRRLA DAARGLGANL EQPPLALDGP EEVRQAAQAF NAMQQRLIAM VNDKAYFLAA VSHDLRTPLT RMRLRLERLP DDEHRQRLRQ NITQMDDMIG QVLDYLRAGE QQNLQQVDLD RLVARQCADL ACAEEPLPVH GQAGSLRVDA LLLQRCLQNL LVNALRYAQD ISVTLERAST GVFIHIDDRG PGIAPALLTT ITDPFVRGEG SRNQASGGYG LGLSIAQRIA TSHGGELMLS NREGGGLRVS ILLPI
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