| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0258 |
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| Symbol | |
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| ID | 5867955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 301352 |
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| End bp | 302680 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545338 |
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| Product | outer membrane porin |
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| Protein accession | YP_001666507 |
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| Protein GI | 167031276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.103273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGT CCAGCCTGGC TCTGGCCGTG GCACTGGGGG TTCTCGCCCA ACAAGCAGGC
GCTGCCGGTT TCGTTGAAGA CAGCAAACTG TCGCTCAGCT CGCGCACCAT GTACTTCAAC
AACGACAACC GTGACGGCGG TGCAGACAAC CGCGAATCGG GTCAGGGCTT CAAGCTCGAC
TACATCTCCG GCTTCACCGA AGGCACCGTT GGTTTTGGTG TCGATGCCCA GGCCCTGTGG
GGTATCCACC TGGACGGTGG CCGTGGCAAG CACCCTGACA ACAGCAGCTT CTTCCCAAGC
GACACCGACG GTTCGGCTGT GAGCCAGTGG GCGCGTGTTG GCGCCAACGC CAAGGCCCGC
TTCTCGAAGA CCGAGGTGCA CTTCGGTAGC GCCCTGGCGC CGAACCTGCC GATCCTGGTC
TCCAACGATG GCCGTCTGCT GCCGCAAACC TTCGAGGGTG GCACCATCCA GTCGAAGGAA
ATCGACAACC TGACCATCAA CGCCGGTCAG CTGACCCACG CCATGGGCCG TGCGTCGAGC
AACCGTACGG GTCTGTCGGT CAACGGTGGT ACCCAGGACA GCAACAAGTT CCGTTACGGC
GGCCTGGACT ACAAGCTCAC CAAAGACCTG ACCCTGCAGT ACTACTACTC GAACCTGGAA
GACTACTACA AGCAGCACTT CCTGGGCCTG ACCCACGTGT TCCAGATCGA CCAGGACCAG
TCGTTCAAGA CTGACCTGCG TTACTTCGAC AGCAGCAGCG ACGGCAAGAA CGGCGAAGCC
GGCTACCGCT TCAACAACAA CGGTGGCTAC GCCAAGAACA CTGGCGAGGT CGACAACAAG
ACCTGGTCCG CGATGTTCAC CTACACCCTG GGTGGCCACT CGCTGATGCT CGGCCACCAG
CGCGTCAATG ACGACGGTGG CTTCGTCTGG TTGAACCAGG GCAGCGTGGT TGACGGCAAC
GGCCGCAACG AAGGCGCCGG TGGTTCCAGC TTCTACCTGT TCACCGACAG CATGATCAAC
CAGTTCGCCA AGGCCGGTGA AAACACCACC TTCGGTCAGT ACGCCTACGA CTTCGCTCGC
CTGGGCGTGC CGGGCCTGAA AGCCTCGGTT GCCTACCTGA AAGGTGAAGA CGGCAAGAAC
GCCGTTGGCG GCGGTACTTT CAGCGAATGG GAACGTGACG CTCGCGTCGA CTACGTTATC
CAGGAAGGCA CCTTCAAGGG CCTGGGCGCC AGCCTGCGTC ACGGCGTATA CCGTGGCACC
GGCACCAGCT CGCTGGCTGA CCAGGATCAG ACCCGTCTGA TCTTCAACTA CACTTACAAC
TTCCTGTAA
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| Protein sequence | MYKSSLALAV ALGVLAQQAG AAGFVEDSKL SLSSRTMYFN NDNRDGGADN RESGQGFKLD
YISGFTEGTV GFGVDAQALW GIHLDGGRGK HPDNSSFFPS DTDGSAVSQW ARVGANAKAR
FSKTEVHFGS ALAPNLPILV SNDGRLLPQT FEGGTIQSKE IDNLTINAGQ LTHAMGRASS
NRTGLSVNGG TQDSNKFRYG GLDYKLTKDL TLQYYYSNLE DYYKQHFLGL THVFQIDQDQ
SFKTDLRYFD SSSDGKNGEA GYRFNNNGGY AKNTGEVDNK TWSAMFTYTL GGHSLMLGHQ
RVNDDGGFVW LNQGSVVDGN GRNEGAGGSS FYLFTDSMIN QFAKAGENTT FGQYAYDFAR
LGVPGLKASV AYLKGEDGKN AVGGGTFSEW ERDARVDYVI QEGTFKGLGA SLRHGVYRGT
GTSSLADQDQ TRLIFNYTYN FL
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