Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0243 |
Symbol | |
ID | 5867940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 284762 |
End bp | 285406 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545323 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001666492 |
Protein GI | 167031261 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.113433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTTG ATCGCCTGCT GGAAGGCTTG CTCGATACCC TGCTGATGGT CGGCGTTTCG TCGCTGATCG CCCTGCTGGT GGGCGTACCG ATGGCGGTGC TGCTGGTCAC CAGCGACAAG GGCGGGATCT TCGAGGCGCC GCTGCTGAAC CGGGTGCTGG GCGCCTTCGT CAACCTGTTC CGCTCGATCC CGTTCCTGAT CCTGATGGTC GCGCTGATCC CCTTCACCCG CCTGGTGGTA GGCACCACCT ACGGCGTGTG GGCGGCGGTG GTGCCGCTGA CCATCGCCGC CACGCCGTTC TTTGCGCGGA TTGCCGAGGT CAGCCTGCGC GAGGTCGACC ATGGCTTGGT GGAGGCCGCA CAGGCCATGG GCTGCCGGCG CTGGCACATT GTCTGGCATG TGCTGCTGCC CGAGGCACTG CCGGGCATCG TGGGGGGGTT CACCATTACC CTCGTGACCT TGATCAACTC TTCGGCGATG GCTGGGGCGA TTGGTGCTGG AGGGTTGGGG GATATCGCCT ACCGGTATGG CTACCAGCGT TTCGACAGCC AGATCATGCT GACCGTGATT GCCTTGCTGG TGGCGTTGGT GGCGTTGATC CAGCTGGGCG GGGACCGCTT GGCGAAGGGC TTGAACAAGC GTTGA
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Protein sequence | MWFDRLLEGL LDTLLMVGVS SLIALLVGVP MAVLLVTSDK GGIFEAPLLN RVLGAFVNLF RSIPFLILMV ALIPFTRLVV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLVEAA QAMGCRRWHI VWHVLLPEAL PGIVGGFTIT LVTLINSSAM AGAIGAGGLG DIAYRYGYQR FDSQIMLTVI ALLVALVALI QLGGDRLAKG LNKR
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