Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0233 |
Symbol | |
ID | 5867930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 269406 |
End bp | 270311 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545313 |
Product | taurine dioxygenase |
Protein accession | YP_001666482 |
Protein GI | 167031251 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAATG CTGCCCTGGC CACCGCGCCA CAAGCCCTTG AACTCGACAT TCACCCGGTT GCCGGCCGTA TCGGCGCCGA AATCCGCGGG GTAAGACTGT CCGCCGACCT CGACGCAGCT ACCGTCGAGG CTATTCAGGC GGCCCTGGTA CAACACAAAG TGATCTTCTT CCGTGAGCAG ACCCACCTGG ATGACCAGAG CCAGGAAGGT TTTGCCAAAC TGCTCGGCGA GCCGGTGGCC CACCCGACCG TACCGGTGGT CGATGGCACC AGCTACCTGC TGCAACTGGA TGGCGCCGAA GGTCAGCGAG CCAACTCCTG GCACACCGAC GTGACCTTCG TCGATGCCTA CCCCAAAGCC TCGATCCTGC GCAGCGTGGT GGCGCCGACA TCCGGTGGCG ATACCGTGTG GGCCAACACG GCTGCGGCCT ACCAGGAATT GCCTGAGCCG CTGCGCGAGC TGGCCGACAA GCTGTGGGCG GTGCACAGCA ACGAATACGA CTACGCCAGC ATCAAGCCAG ATGTAGACCC GGCCAAGCTT GAGCGTTATC GCAAGGTATT CACATCGACC GTGTACGAAA CCGAGCACCC GGTGGTACGC GTGCATCCGA TCAGTGGTGA GCGGGCACTG CAATTGGGGC ACTTCGTTAA ACGCATCAAG GGCTATTCGC TGGCAGATTC GCAGCACCTG TTCGCTGTGC TGCAAGGGCA TGTGACGCGC CTGGAGAACA CTGTGCGCTG GCGCTGGCAG GTGGGGGATG TGGCGATTTG GGATAACCGC GCGACGCAGC ATTATGCGGT GGATGATTAT GGGACCCAGC CGCGGGTTGT GCGCCGGGTC ACATTGGCGG GAGAAGTCCC GGTGGGTGTG GATGGTCAAC TGAGCCGGAC TACGCGTAAA GGTTGA
|
Protein sequence | MSNAALATAP QALELDIHPV AGRIGAEIRG VRLSADLDAA TVEAIQAALV QHKVIFFREQ THLDDQSQEG FAKLLGEPVA HPTVPVVDGT SYLLQLDGAE GQRANSWHTD VTFVDAYPKA SILRSVVAPT SGGDTVWANT AAAYQELPEP LRELADKLWA VHSNEYDYAS IKPDVDPAKL ERYRKVFTST VYETEHPVVR VHPISGERAL QLGHFVKRIK GYSLADSQHL FAVLQGHVTR LENTVRWRWQ VGDVAIWDNR ATQHYAVDDY GTQPRVVRRV TLAGEVPVGV DGQLSRTTRK G
|
| |