| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0229 |
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| Symbol | |
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| ID | 5867925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 263486 |
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| End bp | 265216 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545308 |
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| Product | hypothetical protein |
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| Protein accession | YP_001666478 |
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| Protein GI | 167031247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGA AAAAACTCAC CGCCACCACC CTGCTGCTGG CCAGCATCGG CTTGTTCACT
CAGCCAGCCC AGGCCAACCT CACCCAGCAG CAGTCCGCTG CCATCGTCAA AGCCTTCGAC
GGCAGCGACC CAAGCGACTT CAAGCAGTTC CTCGGCAAGC TCAAAGGCAG CGACTTGGCC
AAGGCCGATA ACCTCGAGGT AACCCTCGAC GCCTACCTGG CCAACACACC ATTGGCCGCC
GAGCAACAGG ACGAAATCAA CCGCCTGCTC GGCCTGTATA CCCGCATCAA GTACGGCAAG
GCTGCAACCG AAACCCTGCG CGAACTGGTG GCCATTCCCA CCTTCAACGT CGAGGGCACG
CCGCAGTACG AAAACCCTGA GTTCCTCAAG ATCGCCGACA AGATCAAGGC CCTGGCCGAC
AGCTTCGGCC TGGCCTTCCG CAACATCGAC AACCGGGTGT ACGAAATTTC GCTGGGTAGC
GGCAAGGAAG TGATCGGCAT CCATGCCCAC GCCGACGTGG TACCGGTCAA CCCGGACAAC
TGGAAGCTGG CCGACGGTAC GCGCTTGGAC CCGTTCAAGG TCACCCTGGT CGGTGACCGC
ATGTACGGCC GCGGCACCGA AGACGACAAG AACGGCATCG TGGTGGCGAT GTATGCACTG
AAGGTAGCCA AGGATGAAAA CTTGCCGCTC GCCCGGCAGT TCAAGCTGCT GATCGACACC
ACCGAAGAAA CCAGCGGTGA TGCCATCCCC TACTATTTCG AGCGCAACCC TACACCTGAC
TACAACCTGG CCCTCGACGG CGGCTACCCA GTGGTCATCG CCGAAAAAGG CTACGGCACG
GTCATGGCCA GCTTCAGCAA GCGCCCGGCC ACGGGCAAGG GTGCCGAAAT CGTCAACCTG
ACCGGTGGCC TGGCCACCAA CCAGATCCCG ACCACATCGG TGGCGACCCT GGTGTCCGAC
AACCCGGCAC AGCTGGCCAA ACACCTGCAG CAAGCCGGCA GCAAGTATGT GAAGCAGCAC
GGAAGCGACT TCAGCATCGA TGCCAAGGCC GACGGCAAAC AGGTGTTGCT CACCGTGACC
GGTGTTTCCG CCCACTCTTC GGAGCCGGAG TCCGGGGTGA ACCCGGTTGC TCGCATGCTC
GACTTCATCA ACGGCCTTGG CCAGCAGGTA CCACTCAAGC ACAACCAGTT CACCGATGCG
GCCCGCTACG CGGCCGACAA CTGGGGCCTG GACTACCTTG GCAACAAGCT CGGCGTGGCC
TTCAAGGACC CGTTCATGGG CCCACTGACC GCCTCGCTGA CCTTTGTCGG CGTGGATGAC
AAGGGCCTGA AATTGGCGGT GAACCTGCGC ATCCCCAAAG GCAAACCCAT TGCCACGATC
AAGGATGAAC TGGCCGACAA ACTGGGCAAG TGGACCCGGC AAAGTCACAC CTCGGTGGCG
TTCGACTATA GCCTGGACGA ACCGATGTAC CGCAACCCCG AAGGCGAATG GGTGAAAGCT
TTGCTTGCTG TGGCCTCCGA GAACCTGGGC ATGAAGCATG AGTTCGGCAC CTCGGCCGGC
GCGACCTCGG TGCACGACTT GCCCAATGGC GTACAGTTCG GCCTGGCCAT GCCGGACGTG
AAATACACCG GGCACAACGA CAACGAGTTC AAGACCGTGG ACCAGTTCAT GCTGGACCTG
CAGGTAGTGA GCGAGATGGT GGCACGGCTC GGGCAAATGC CGAAGCTTTG A
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| Protein sequence | MHLKKLTATT LLLASIGLFT QPAQANLTQQ QSAAIVKAFD GSDPSDFKQF LGKLKGSDLA
KADNLEVTLD AYLANTPLAA EQQDEINRLL GLYTRIKYGK AATETLRELV AIPTFNVEGT
PQYENPEFLK IADKIKALAD SFGLAFRNID NRVYEISLGS GKEVIGIHAH ADVVPVNPDN
WKLADGTRLD PFKVTLVGDR MYGRGTEDDK NGIVVAMYAL KVAKDENLPL ARQFKLLIDT
TEETSGDAIP YYFERNPTPD YNLALDGGYP VVIAEKGYGT VMASFSKRPA TGKGAEIVNL
TGGLATNQIP TTSVATLVSD NPAQLAKHLQ QAGSKYVKQH GSDFSIDAKA DGKQVLLTVT
GVSAHSSEPE SGVNPVARML DFINGLGQQV PLKHNQFTDA ARYAADNWGL DYLGNKLGVA
FKDPFMGPLT ASLTFVGVDD KGLKLAVNLR IPKGKPIATI KDELADKLGK WTRQSHTSVA
FDYSLDEPMY RNPEGEWVKA LLAVASENLG MKHEFGTSAG ATSVHDLPNG VQFGLAMPDV
KYTGHNDNEF KTVDQFMLDL QVVSEMVARL GQMPKL
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