Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0225 |
Symbol | |
ID | 5867921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 261401 |
End bp | 261859 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545304 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_001666474 |
Protein GI | 167031243 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATGG CAAAGACCCT GCAGGCCCGC CTGGACAAGG CCAACTGCGA CTACGACATC ATTCCCCACC CACATTCGGC CACCAGCCTG GAGTCGGCCC GCACGGCCGG CGTGCCCGCC GAGCGGGTCG CCAAGTCGGT GATGCTCGAT GACCGTCATG GCAACTACAT CATGGCCGTG CTGCCGGCCA ACCGGCATCT GGACATGAGC AAGGTTCGCA TGTCCGGGGC TTGGCAACTG ACCCGTGAAA GTGGCCTGCC AAGCTTGTTC AATGACTGCG AGCGCGGCGC AGTGCCGGCC CTTGGCGATG CTTACCAGAT AAAAATGCTG CTCGACCCGA GCCTAACCCG CCAGGGTGAT GTCTACCTGG AGGCGGGTGA TCACGATCAC TTGATCCACA TGAGCATGGA GCAGTACATG AAGCTGGTGC CGCACGCCGA AGTGCGCGAG CTGTGCTGA
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Protein sequence | MRMAKTLQAR LDKANCDYDI IPHPHSATSL ESARTAGVPA ERVAKSVMLD DRHGNYIMAV LPANRHLDMS KVRMSGAWQL TRESGLPSLF NDCERGAVPA LGDAYQIKML LDPSLTRQGD VYLEAGDHDH LIHMSMEQYM KLVPHAEVRE LC
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