Gene PputGB1_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0214 
Symbol 
ID5867910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp250794 
End bp252032 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID641545293 
ProductHemY domain-containing protein 
Protein accessionYP_001666463 
Protein GI167031232 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0507923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTG TCTACCTGCT GGCCGTGCTG GCAATCGTGG TTGCCGCCGC GCTGGGCATC 
GCAGTCGCCA AGCACAGCGG TTACGTGCTG ATTTCCTATG GTGGTTTCCG CTATCAATCG
GGGCTGTGGG CGGCCCTGGC CGGCTTGCTG GCCGTGGTCG CGCTGTTGTG GCTGTTGCGC
TACCTGGTCG GCCTGGTGCT GACCTCCAGC GGTGTGGTCA ACCCGTGGTC GCGGCGTAAC
CGCAGCCGGC GCATCCGCGT GGCCATCGAG CAGGGCCAGC TCGATCTCGC CGAGGGTCGC
TGGGCCAGCG CTCAGCGTCA CCTGCACCGC GCCGCCGAGG CCGAGCGCCA ACCGCTGCTG
TATTACCTCG GTGCCGCGCG TGCTGCCAAC GAGCAAGGCC GCACCGAAGA CAGCGACAAC
CTGCTGGAGC GTGCCTTGGA GCGCCAGCCG CAAGCGGAAC TGGCCATTGC CCTGACCCAT
GCCCAGTTGC AAATGGACCG TGGTGAAACC GATGGGGCTC TGGAAACCCT GCTGGCCATG
CAGGAGCGCC ACCCGCACAA CAGCCAGGTG TTGCGCCTGC TGCAACGCCT GTACCTGGAG
CGCGGCGACT GGTCCGCACT GATCCGCCTG CTGCCCGACC TGCGCAAGGG CAAGGTGTTG
CCGCCCGCCG AGCTGGCCGC CCTGGAGCAG CGTGCCTGGG GCCAGAACCT GAGCCTGGCC
ACCACCCGTG GCGAGGACGC GCAAACTGCA CGTCAGGCCC TGGAGCGCGC CTGGCAACAG
CTGACCGCAG CCCAGCGCCA AGAGCCACAG CTGGTATTGG CGTACGCCGA GCAATTGCGC
CAGGTAGGTG CCCAGAGCGA GGCCGAGCAC GTGCTGCGCA CTGCCCTCAA GCGCGAATAC
GAAAGCCACC TGGCCCGCCT TTATGGCTTG GTGCGCGGTG ATGATCCGGC GCGTCAGCTG
CAAACCGCAG AAGGTTGGCT CAAGGCCCAC CCGCAAGACG CCAGCCTGCT GCTGACCTTG
GGCCGTCTGA GCCTGCAGAA CCGCCTGTGG GGCAAGGCGC GTGATTACCT GGAAAGCAGC
CTGCGCATGG AGCGCAACCC CGAGGCCTGT GCCGAGCTGG CTCGCTTGCT CGCGGGGCTG
GGCGAGACCG AGCGCAGCAA CCAGCTGTTC CAGGAGGGCC TTGGCCTGCT GGACGAACGC
CTGCTGGCGC TGCCTTTGCC CGAAGGCGTA CGCGCCTGA
 
Protein sequence
MKRVYLLAVL AIVVAAALGI AVAKHSGYVL ISYGGFRYQS GLWAALAGLL AVVALLWLLR 
YLVGLVLTSS GVVNPWSRRN RSRRIRVAIE QGQLDLAEGR WASAQRHLHR AAEAERQPLL
YYLGAARAAN EQGRTEDSDN LLERALERQP QAELAIALTH AQLQMDRGET DGALETLLAM
QERHPHNSQV LRLLQRLYLE RGDWSALIRL LPDLRKGKVL PPAELAALEQ RAWGQNLSLA
TTRGEDAQTA RQALERAWQQ LTAAQRQEPQ LVLAYAEQLR QVGAQSEAEH VLRTALKREY
ESHLARLYGL VRGDDPARQL QTAEGWLKAH PQDASLLLTL GRLSLQNRLW GKARDYLESS
LRMERNPEAC AELARLLAGL GETERSNQLF QEGLGLLDER LLALPLPEGV RA