Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0214 |
Symbol | |
ID | 5867910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 250794 |
End bp | 252032 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641545293 |
Product | HemY domain-containing protein |
Protein accession | YP_001666463 |
Protein GI | 167031232 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | [TIGR00540] hemY protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0507923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTG TCTACCTGCT GGCCGTGCTG GCAATCGTGG TTGCCGCCGC GCTGGGCATC GCAGTCGCCA AGCACAGCGG TTACGTGCTG ATTTCCTATG GTGGTTTCCG CTATCAATCG GGGCTGTGGG CGGCCCTGGC CGGCTTGCTG GCCGTGGTCG CGCTGTTGTG GCTGTTGCGC TACCTGGTCG GCCTGGTGCT GACCTCCAGC GGTGTGGTCA ACCCGTGGTC GCGGCGTAAC CGCAGCCGGC GCATCCGCGT GGCCATCGAG CAGGGCCAGC TCGATCTCGC CGAGGGTCGC TGGGCCAGCG CTCAGCGTCA CCTGCACCGC GCCGCCGAGG CCGAGCGCCA ACCGCTGCTG TATTACCTCG GTGCCGCGCG TGCTGCCAAC GAGCAAGGCC GCACCGAAGA CAGCGACAAC CTGCTGGAGC GTGCCTTGGA GCGCCAGCCG CAAGCGGAAC TGGCCATTGC CCTGACCCAT GCCCAGTTGC AAATGGACCG TGGTGAAACC GATGGGGCTC TGGAAACCCT GCTGGCCATG CAGGAGCGCC ACCCGCACAA CAGCCAGGTG TTGCGCCTGC TGCAACGCCT GTACCTGGAG CGCGGCGACT GGTCCGCACT GATCCGCCTG CTGCCCGACC TGCGCAAGGG CAAGGTGTTG CCGCCCGCCG AGCTGGCCGC CCTGGAGCAG CGTGCCTGGG GCCAGAACCT GAGCCTGGCC ACCACCCGTG GCGAGGACGC GCAAACTGCA CGTCAGGCCC TGGAGCGCGC CTGGCAACAG CTGACCGCAG CCCAGCGCCA AGAGCCACAG CTGGTATTGG CGTACGCCGA GCAATTGCGC CAGGTAGGTG CCCAGAGCGA GGCCGAGCAC GTGCTGCGCA CTGCCCTCAA GCGCGAATAC GAAAGCCACC TGGCCCGCCT TTATGGCTTG GTGCGCGGTG ATGATCCGGC GCGTCAGCTG CAAACCGCAG AAGGTTGGCT CAAGGCCCAC CCGCAAGACG CCAGCCTGCT GCTGACCTTG GGCCGTCTGA GCCTGCAGAA CCGCCTGTGG GGCAAGGCGC GTGATTACCT GGAAAGCAGC CTGCGCATGG AGCGCAACCC CGAGGCCTGT GCCGAGCTGG CTCGCTTGCT CGCGGGGCTG GGCGAGACCG AGCGCAGCAA CCAGCTGTTC CAGGAGGGCC TTGGCCTGCT GGACGAACGC CTGCTGGCGC TGCCTTTGCC CGAAGGCGTA CGCGCCTGA
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Protein sequence | MKRVYLLAVL AIVVAAALGI AVAKHSGYVL ISYGGFRYQS GLWAALAGLL AVVALLWLLR YLVGLVLTSS GVVNPWSRRN RSRRIRVAIE QGQLDLAEGR WASAQRHLHR AAEAERQPLL YYLGAARAAN EQGRTEDSDN LLERALERQP QAELAIALTH AQLQMDRGET DGALETLLAM QERHPHNSQV LRLLQRLYLE RGDWSALIRL LPDLRKGKVL PPAELAALEQ RAWGQNLSLA TTRGEDAQTA RQALERAWQQ LTAAQRQEPQ LVLAYAEQLR QVGAQSEAEH VLRTALKREY ESHLARLYGL VRGDDPARQL QTAEGWLKAH PQDASLLLTL GRLSLQNRLW GKARDYLESS LRMERNPEAC AELARLLAGL GETERSNQLF QEGLGLLDER LLALPLPEGV RA
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