| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0211 |
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| Symbol | hemC |
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| ID | 5867907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 247946 |
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| End bp | 248887 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545290 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001666460 |
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| Protein GI | 167031229 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.204763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTC GCGAAATCCG CATTGCCACC CGTAAAAGTG CCTTGGCCCT GTGGCAGGCC
GAATACGTCA AAGCCCGTCT CGAGCAGGCT CACCCGGGTC TGCTGGTGAC CCTGGTGCCC
ATGGTCAGCC GTGGTGACAA GCTACTCGAC GCGCCGCTGG CGAAAATCGG CGGCAAAGGC
CTGTTCGTCA AGGAGCTGGA AACCGCCCTG CTGGACAACG AAGCCGACAT CGCCGTGCAT
TCGATGAAGG ACGTGCCCAT GGACTTCCCC GAAGGCCTGG GCCTGTACTG CATCTGCGAG
CGTGAAGACC CGCGTGACGC CTTCGTTTCC AATACGTTCG ACAGCCTCGA AGCACTACCT
GCCGGCAGCA TCGTCGGCAC CTCCAGCCTG CGCCGCCAGG CCCAGTTGCT GGCGCGCCGG
CCAGACCTGC AAATCCGCTT TCTGCGGGGC AACGTCAACA CCCGCCTGGC CAAGCTGGAT
GCCGGCGAGT ACGACGCCAT CATCCTCGCC GCTGCTGGCC TGATCCGTCT GGGCTTCGAA
GACCGCATCA CCTCCACCAT CAGCGTCGAT GACAGCCTGC CGGCTGGCGG CCAGGGCGCC
GTGGGTATCG AGTGCCGCAG TGCCGACGTT GAGATTCATG CATTGCTGGC GCCACTGCAC
CATGCCGATA CCGCCGACCG GGTGGTGGCC GAACGTGCCC TGAACAAGCA CCTGAATGGC
GGCTGCCAGG TGCCGATCGC CTGCTATGCG GTGCTTGAAG GCGACCAGCT GTGGCTGCGT
GGCCTGGTCG GCCAGCCGAG TGGCGGAACG CTGCTGGTGG CCGATGCCCG CGCCCCTCGC
ACTGCTGCCG AAACCTTGGG CGTACAGGTA GCCGAGGACT TACTGAGCCA GGGCGCCGAG
GCCATCCTCA AGGAAGTCTA TGGCGAGGCC GGCCACCCGT GA
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| Protein sequence | MSTREIRIAT RKSALALWQA EYVKARLEQA HPGLLVTLVP MVSRGDKLLD APLAKIGGKG
LFVKELETAL LDNEADIAVH SMKDVPMDFP EGLGLYCICE REDPRDAFVS NTFDSLEALP
AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE
DRITSTISVD DSLPAGGQGA VGIECRSADV EIHALLAPLH HADTADRVVA ERALNKHLNG
GCQVPIACYA VLEGDQLWLR GLVGQPSGGT LLVADARAPR TAAETLGVQV AEDLLSQGAE
AILKEVYGEA GHP
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