| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0201 |
|---|
| Symbol | |
|---|
| ID | 5867897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 237203 |
|---|
| End bp | 239290 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641545280 |
|---|
| Product | fusaric acid resistance protein region |
|---|
| Protein accession | YP_001666450 |
|---|
| Protein GI | 167031219 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCT TCTTCAGCTC GGTTCCCCCG GCCCGCGACT GGTTCTACGG CGTGCGTACT
TTCGCTGCCT CCATGATCGC CTTGTACATC GCGTTGCTCA TGCAGCTGCC GCGCCCCTAT
TGGGCGATGG CCACGGTGTA CATCGTCTCC AGCCCGTTCG TCGGCCCGAC CAGCTCAAAG
GCGCTGTACC GCGCCGTGGG CACGTTGCTT GGCGCCGGTG GGGCCATTTT CCTGGTGCCG
CCGCTGGTGC AGTCACCGTT GCTGCTGAGC ATCGCCATTG CCCTGTGGAC AGGCACCTTG
CTGTTCCTTT CGCTGAACCT GCGCACGGCC AACAACTACG TGCTGATGCT GGCCGGCTAC
ACCCTGCCGA TGATTGCGCT GGCGGTAGTG GATAACCCGT TGGCGGTGTT CGACGTAGCG
TCTTCTCGCG CCCAGGAAAT CTGCCTGGGT ATCGTCTGCG CGGCGGTGGT CGGGGCCATT
TTCTGGCCGC GCCGGCTGGC GCCGGTGGTG GTCGGCGCCA CCAGTAACTG GTTCACCGAG
GCGATCCGCT ACAGCGACAT CTACCTGGCC CGTGAGGTCA GCGCCGACAA GATCGGCGGT
ATGCGTGGGG CGATGGTTGC TACCTTCAAC TCGCTGGAGC TGATGATCGG TCAGCTCGGC
CACGAAGGTG CCGGCCCGCA TACCGTGAAG AACGCCCGCG AGTTGCGTGG GCGGATGATT
CACCTGCTGC CGGTGATCGA CGCGCTCGAC GACGCCTTGG TGGCCCTGGA AGGCCGCGCC
CCGGCCCAGT TCGCTCAGCT TCAACCTGTG CTTGAGGCCG CTCGCGAATG GCTGAAAGGC
ACTGCCGACA GCCCCTCGGT CGCACGCTGG ACCACGCTGC ATGAGCAGAT CGACCGCCTG
CAGCCAGGTG CTGCGGCCCT AGACCAGCGC GCCGAGCTGC TGCTGTCCAA CGCCCTGTAC
CGCCTGACCG AATGGGCTGA CCTGTGGCAG GACTGCTGCA CCCTGCAGCA CGCCCTGCGT
ACCGATGATG CCAAGCCCTG GCGCGCGGTG TACCGCCACT GGCGCCTGGG CCGCCTGACG
GCCTTCTTCG ACCGTGGCCT GATGCTGTAT TCGGTGGCCT CCACCGTATT GGCGATCGTC
GTCGCTTGCG GCCTGTGGAT CGGCCTGGGC TGGAACGACG GCGCCAGCGC GGTGATCCTC
GCGGCCGTGT CGTGCAGCTT CTTCGCCGCC ATGGACGACC CGGCGCCGCA GATCTACCGG
TTTTTCTTCT GGACGCTGAT GTCGGTCATC TTCTCCAGCC TGTACCTGTT CCTGGTGTTG
CCCAACCTGC ACGACTTCCC GATGCTGGTG CTGGCTTTCG CCGTGCCGTT CATCTGCATC
GGCACCCTCA CCGTGCAGCC GAGGTTTTAC CTGGGCACCT TGCTGACCAT CGTCAACACC
TCGACCTTCA TCAGCATCCA GGGCGCCTAC GACGCCGACT TCTTCACCTT CCTCAACTCC
AACCTTGCCG GTCCCGTTGG CTTGTTGTTC GCCTTCATCT GGACCCTGGT GATGCGCCCG
TTCGGCGTGG AGCTGGCGGC CAAGCGCATG ACCCGCTTCG CCTGGCGTGA CATCGTCGAA
ATGACCGAGC CGGCGACCCT GGCCGAACAC CGCCAGGTTG GCGTGCAGAT GCTCGACCGC
CTGATGCAGC ACCTGCCGCG CCTGTCGCAA ACCGGCCAGG ACAGTGGTGT GGCACTGCGT
GACCTGCGTG TGGGGCTGAA CCTGCTCGAC CTGCTGGCCT ATATGCCGCG CGCCGGCCAG
CAGGCCCGCG AGCGCCTGAG CACGGTGGTC GAGGAAGTCG GCGCGCACTA TGCCGCCTGC
CTGCGTGCCG GCGAGCGCCT GCACGCACCA GCCGCGCTGC TGCGCAACAT GGAGCGCGCC
CGGCTGGCGC TGAACCTGGA TGAGCTGTAC GAGCGCGGCG ATGCCCGCAC CCACCTGCTG
CATGCCCTGA GCGGCCTGCG CCTGGCGTTG CTGCCAGGTG TGGAGGTGAT GCTCGAACCC
GCCGAACAAC CGCAACTGCC CCCCGGCCTC GACGGAGCAC CCCTGTGA
|
|---|
| Protein sequence | MNGFFSSVPP ARDWFYGVRT FAASMIALYI ALLMQLPRPY WAMATVYIVS SPFVGPTSSK
ALYRAVGTLL GAGGAIFLVP PLVQSPLLLS IAIALWTGTL LFLSLNLRTA NNYVLMLAGY
TLPMIALAVV DNPLAVFDVA SSRAQEICLG IVCAAVVGAI FWPRRLAPVV VGATSNWFTE
AIRYSDIYLA REVSADKIGG MRGAMVATFN SLELMIGQLG HEGAGPHTVK NARELRGRMI
HLLPVIDALD DALVALEGRA PAQFAQLQPV LEAAREWLKG TADSPSVARW TTLHEQIDRL
QPGAAALDQR AELLLSNALY RLTEWADLWQ DCCTLQHALR TDDAKPWRAV YRHWRLGRLT
AFFDRGLMLY SVASTVLAIV VACGLWIGLG WNDGASAVIL AAVSCSFFAA MDDPAPQIYR
FFFWTLMSVI FSSLYLFLVL PNLHDFPMLV LAFAVPFICI GTLTVQPRFY LGTLLTIVNT
STFISIQGAY DADFFTFLNS NLAGPVGLLF AFIWTLVMRP FGVELAAKRM TRFAWRDIVE
MTEPATLAEH RQVGVQMLDR LMQHLPRLSQ TGQDSGVALR DLRVGLNLLD LLAYMPRAGQ
QARERLSTVV EEVGAHYAAC LRAGERLHAP AALLRNMERA RLALNLDELY ERGDARTHLL
HALSGLRLAL LPGVEVMLEP AEQPQLPPGL DGAPL
|
|---|
| |