| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0185 |
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| Symbol | |
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| ID | 5867882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 203842 |
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| End bp | 205998 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545266 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001666436 |
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| Protein GI | 167031205 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.206215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATCCG AAGTCAGTCG AGTCCAACTC AGCCACGATC CACGCAGTCA GCATGACGAT
CCCCTGCTGG ATAGTCTGTT GAGCCTGTGT GTGCTGCACC AGAAACCCGC CAGCCGGGTC
ATGTTGACCA CAGGCCTGCC GCTGCCCGCC CAGCGCCTGA GCCCCGAGCT GCTGCCCCGT
GCCGCCGCCC GGGCAGGCCT GCAAGGGCGC CTGCTGCAGC GCAAGCTGGA GCAGATCCCG
AGCATCGCCA TGCCGGCCAT GCTGCTGCTC AAGGAAGGCC GCAGCGCCGT TCTGCTGGGC
TGGGAAAATG AGGACACCGC ACGCCTGCTG CTCAGCGAGA GCGATGGTGG CGAGGTGCAC
GTCAGCCGTG AAGCGCTGCA AAGCGACTAC AGCGGCCGCG TGTTCTTTGC GCAGCCGCAG
CACAAGTTCG ACGTCAACCA CGGCAACCTC ATCCCACGGG CGAAGTCGTG GTTCCGCGAC
ACCCTGCTGC GCAGCAAGTG GCTGTACATC GACGCGATCG CCGCCAGCCT GGTGATCAAC
CTGATCGCCC TGGCCGCGCC GCTGTTCGTG ATGAACGTGT ATGACCGGGT GGTGCCCAAC
CAGGCCACCT CGACGCTCTG GGTGCTGGCC ATCGGTATCG CCGGCGCGTA CATCTTCGAC
CTGATACTCA AGGGCCTGCG CGGCCTGTGC CTGGACCTGG CCGGCAAAAA GACCGACCTG
ATCATCTCGG CAACGCTGTT CGAGCGCATC GTCGGCATGT CGATGAAGTA CCGGCCTGCA
CGGGTCGGCA GCTTTGCTCA GAACATTCAC GAGTTCCAGG GCCTGCGCGA CTTCCTTGCC
TCGCTGACCC TGACCAGCCT GATCGACCTG CCTTTCACCA TCCTCATCCT GATCGTCATC
GCCATCATTG GCGGCCACCT CGTATGGATC CCGATTATTG CCTTCCCGCT GGCCCTGGGC
ATCGGCTACG CCCTGCAACG GCCGCTGATG GCGACCATGG AACGGACCAT GGCCCTAGCC
TCTGAGCGCC AGTCCAGCCT GATCGAGACA CTGGCCGGCC TGGATGCGGT GAAGGTCAAC
AACGCCGAAA GCGAGCGTCA GTACATGTGG GAGCAGACCC TCGGCACCCT CAGCCGCCTG
GAACTGCGTG TAAAGGTGCT GTCGAGCCTG GCGATGAATA TCACCCTGCT GATCCAGCAA
CTGGCAGGCG TGGCAATGAT CTGCGTCGGC GTGTACCTGA TCATCGACGG CAACCTGAGC
ATGGGCGGCC TGGTGGCCTG CTACATGCTC AGCGGCCGCG CCCTCGGCCC GCTGGGCCAG
CTCAATGGCC TGCTCGCCCG CTATCAGCAA GCCAAGGTGA CCATGGTCTC CACCGACCAT
ATGATGGAGC TGCCGCAAGA GCGCAACTTC GAAGAGCGCC CGCTGAGCCG CAAGGTGCTG
CAGGGTAGCG TCGAGTTCCG TGGGGTCGAC TTCACCTACC CGAACCAGCA GAACCTGGCC
CTGAAGAACA TCAACCTCAC CATCCGCCCT GGCGAGAAGG TCGGCATCAT CGGCCGCAGC
GGCTCGGGCA AGAGCTCGCT GGCCAAGCTT ATCGTCGGCC TGTACGAGGC CGATGGTGGC
TCACTGCTGG TCGATGGCGT GGACATTCGC CAGATCGATG TCAGCGAACT GCGCCACAAT
ATCGGCTACG TCCCGCAGGA CATCCAGCTA TTGGCCGGCA CCTTGCGTGA CAACCTGGTC
AGCGGCGCCC GCTACATCGA AGACGAATTG ATCCTGCAAG CCGCCGAACT GGCGGGCGTG
CATGAGTTCG CCCGGCTGCA CCCGGACGGC TATGAGCTGC AAGTGGGTGA ACGCGGTCAG
AACCTGTCCG GCGGCCAGCG GCAGAACGTC GCCCTGGGCC GTGCGCTGCT GCTCAACCCA
CAGATACTGC TGCTGGACGA GCCGACCAGC GCCATGGACA ACACCGGTGA AGAACGCCTC
AAGCAGCGCC TGCAAGCGGT GGTGGAAGGC AAGACGGTGC TGCTGGTCAC GCACCGTGCC
TCGCTGCTGT CGCTGGTGGA CCGGCTGATC GTGATCGATC GCGGGCAGAT TGTCGCCGAC
GGCCCGAAAG CCGCGGTCAT GGATGCGCTG AAGAAGGGGC AAATCAGTGT TGCATAA
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| Protein sequence | MESEVSRVQL SHDPRSQHDD PLLDSLLSLC VLHQKPASRV MLTTGLPLPA QRLSPELLPR
AAARAGLQGR LLQRKLEQIP SIAMPAMLLL KEGRSAVLLG WENEDTARLL LSESDGGEVH
VSREALQSDY SGRVFFAQPQ HKFDVNHGNL IPRAKSWFRD TLLRSKWLYI DAIAASLVIN
LIALAAPLFV MNVYDRVVPN QATSTLWVLA IGIAGAYIFD LILKGLRGLC LDLAGKKTDL
IISATLFERI VGMSMKYRPA RVGSFAQNIH EFQGLRDFLA SLTLTSLIDL PFTILILIVI
AIIGGHLVWI PIIAFPLALG IGYALQRPLM ATMERTMALA SERQSSLIET LAGLDAVKVN
NAESERQYMW EQTLGTLSRL ELRVKVLSSL AMNITLLIQQ LAGVAMICVG VYLIIDGNLS
MGGLVACYML SGRALGPLGQ LNGLLARYQQ AKVTMVSTDH MMELPQERNF EERPLSRKVL
QGSVEFRGVD FTYPNQQNLA LKNINLTIRP GEKVGIIGRS GSGKSSLAKL IVGLYEADGG
SLLVDGVDIR QIDVSELRHN IGYVPQDIQL LAGTLRDNLV SGARYIEDEL ILQAAELAGV
HEFARLHPDG YELQVGERGQ NLSGGQRQNV ALGRALLLNP QILLLDEPTS AMDNTGEERL
KQRLQAVVEG KTVLLVTHRA SLLSLVDRLI VIDRGQIVAD GPKAAVMDAL KKGQISVA
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