| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0180 |
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| Symbol | |
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| ID | 5867877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 198050 |
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| End bp | 198553 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545261 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001666431 |
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| Protein GI | 167031200 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.553473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.734896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCA ACGACTGCGT GCAAACGCTC TACAGTGACC ACCACGGCTG GCTGCATGCC
TGGCTGCGCA GCAAGCTAGG CAATGCGGCC GATGCCGCCG ACCTGGCCCA GGACACCTTC
GTACGCTTGC TACAGCGCCG TGAACAATTG CAACTGAATG CACCCAGGGC CTTCCTGCGC
ACGGTAGCGC GCGGGTTGGT GATCGATCAC TGGCGGCGCG AGGAACTGCA CAGGGCTTAC
CTGGAGGCTT TGGCGCATGT GCCGGAAGCA TTGGCCCCCT CTGCCGAAAC CCGCGAGCTG
CTACTGGAGT TGCTTGAGCG CATTGCACGC ATGCTCGACG GCCTCAAACC CAAGGTACGT
CGCGCATTCC TCCTGGCTCA ATGCGAGGGG CTGAAGCACC AGGCCATCGC CGAACAGCTG
GGGATCTCGG TGCGCACCGT AGAACGCTAC ATTGCCGATG CGCTCTATCA CTGCTACGTG
CTGCACTACC AGGACGAGTG CTGA
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| Protein sequence | MPSNDCVQTL YSDHHGWLHA WLRSKLGNAA DAADLAQDTF VRLLQRREQL QLNAPRAFLR
TVARGLVIDH WRREELHRAY LEALAHVPEA LAPSAETREL LLELLERIAR MLDGLKPKVR
RAFLLAQCEG LKHQAIAEQL GISVRTVERY IADALYHCYV LHYQDEC
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