Gene PputGB1_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0172 
Symbol 
ID5867860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp177691 
End bp178005 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content59% 
IMG OID641545245 
Productpyridine proton-translocating NAD(P) transhydrogenase 
Protein accessionYP_001666424 
Protein GI167031193 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.427754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA TGCTGATTTC CCACGGCATC TACAACCTGA TCATCTTCGT GCTGGCCATC 
TATGTGGGCT ACCACGTGGT GTGGAACGTC ACCCCGGCGC TGCACACCCC ACTGATGGCG
GTTACCAACG CCATTTCGGC GATCGTCATC GTCGGTGCCA TGCTGGCTGC CGCGCTGACC
GTGACCCCGG CTGGCAAGCT GATGGGCACG CTTGCCGTGG CCCTGGCTGC AGTCAATGTG
TTCGGTGGCT TCCTGGTCAC CCGCCGCATG CTTGAAATGT TCAAGAAGAA AACCAAGAAC
GAGGCGCAGA AGTAA
 
Protein sequence
MEDMLISHGI YNLIIFVLAI YVGYHVVWNV TPALHTPLMA VTNAISAIVI VGAMLAAALT 
VTPAGKLMGT LAVALAAVNV FGGFLVTRRM LEMFKKKTKN EAQK