Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0172 |
Symbol | |
ID | 5867860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 177691 |
End bp | 178005 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641545245 |
Product | pyridine proton-translocating NAD(P) transhydrogenase |
Protein accession | YP_001666424 |
Protein GI | 167031193 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.427754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA TGCTGATTTC CCACGGCATC TACAACCTGA TCATCTTCGT GCTGGCCATC TATGTGGGCT ACCACGTGGT GTGGAACGTC ACCCCGGCGC TGCACACCCC ACTGATGGCG GTTACCAACG CCATTTCGGC GATCGTCATC GTCGGTGCCA TGCTGGCTGC CGCGCTGACC GTGACCCCGG CTGGCAAGCT GATGGGCACG CTTGCCGTGG CCCTGGCTGC AGTCAATGTG TTCGGTGGCT TCCTGGTCAC CCGCCGCATG CTTGAAATGT TCAAGAAGAA AACCAAGAAC GAGGCGCAGA AGTAA
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Protein sequence | MEDMLISHGI YNLIIFVLAI YVGYHVVWNV TPALHTPLMA VTNAISAIVI VGAMLAAALT VTPAGKLMGT LAVALAAVNV FGGFLVTRRM LEMFKKKTKN EAQK
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