Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0163 |
Symbol | |
ID | 5867851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 168538 |
End bp | 169845 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545236 |
Product | CitMHS family citrate/H+ symporter |
Protein accession | YP_001666415 |
Protein GI | 167031184 |
COG category | [C] Energy production and conversion |
COG ID | [COG2851] H+/citrate symporter |
TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCT TCCTCGGCTT TGCCATGGTC ATCACCTTCA TGTACCTGAT CATGACCAAG CGCCTGTCGG CCTTGATCGC GCTGATCCTG GTACCGATCC TGTTCGCCCT GTTCGGTGGT TTTTCCGCCA AAATCGGCCC CATGATGCTC GAAGGCATCA GCAAGCTCGC GCCAACCGGC GTGATGCTGA TGTTCGCCAT TCTCTACTTC GCCCTGATGA TCGACTCCGG CCTGTTCGAC CCGGCCGTGC GCAAGATCCT CAAACTGGTC AAGGGCGACC CGCTGAAAGT CTCGGTCGGC ACCGCTGTAC TGGCCCTGGT GGTCTCGCTC GACGGTGACG GCGCCACCAC CTACATGATC TGCTGTGCCG CTATGCTGCC GATGTACAGC CGTCTGGGCA TGAGCCCGCG GATCATGGCC GGCCTGATCA TCCTCGCCGG CGGGGTGATG AACATGACCC CGTGGGGTGG CCCGACCGCC CGCGCTGCCA GCGCCCTGCA CGTAGACCCA TCGGACATCT TCGTGCCGAT GATCCCGGCC ATGCTGTTCG GTGTGCTGGC GATCCTGGCC ATCGCCTACA TGTACGGCAA GCGTGAACGT GCTCGCCTAG GCGAACTGCA CCTGCCGACC GACGACATCG ACCACAGTGA AATCACTGTC TCGCAATACC CTGACGCACG CCGGCCCAAG CTGCTGTACT TCAACGGTGC ACTGACCGCT GCCCTGATGG TCGCACTGAT CGCCGGTGTA CTGCCGCTGC CGGTGCTGTT CATGATCGCC TTCAGCATCG CGATGATCGT CAACTACCCA TGCCTGCAGC AGCAGAAGGA CCGCATCGCC GCCCACGCAG GCAGCGTACT GGCCGTGACC GGGCTGATCT TCGCCGCAGG CATCTTTACC GGCATCCTGT CCGGTACCGG CATGGTCGAC GCCATGTCCA AGAGCCTGCT GGCGGTCATC CCCGAAGCGC TGGGCCCTTA CCTGGCGGTG ATCACCGCGA TCGTGAGCAT GCCGTTCACC TTCTTCATGT CCAACGACGC GTTCTACTAC GGCGTGCTGC CAGTGCTGGC CGAAGCCGCC AGCCATTACG GCATCACCCC GGTAGAGATG GCCCGTGCGT CGATCGTCGG GCAGCCAGTA CACCTGCTCA GCCCGCTGGT ACCCTCCACC TACCTGCTGG TGGCCCTGGC CGGTATCGAA TTTGGCGACC ATCAGCGCTT TACACTCAAG TGGGCAGTGT TGGTGTGCCT GTGCATAATG CTCGCCGCAC TGCTGATGGG CATTTTCCCG CTGTTCAGTA GTCTTTAA
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Protein sequence | MLTFLGFAMV ITFMYLIMTK RLSALIALIL VPILFALFGG FSAKIGPMML EGISKLAPTG VMLMFAILYF ALMIDSGLFD PAVRKILKLV KGDPLKVSVG TAVLALVVSL DGDGATTYMI CCAAMLPMYS RLGMSPRIMA GLIILAGGVM NMTPWGGPTA RAASALHVDP SDIFVPMIPA MLFGVLAILA IAYMYGKRER ARLGELHLPT DDIDHSEITV SQYPDARRPK LLYFNGALTA ALMVALIAGV LPLPVLFMIA FSIAMIVNYP CLQQQKDRIA AHAGSVLAVT GLIFAAGIFT GILSGTGMVD AMSKSLLAVI PEALGPYLAV ITAIVSMPFT FFMSNDAFYY GVLPVLAEAA SHYGITPVEM ARASIVGQPV HLLSPLVPST YLLVALAGIE FGDHQRFTLK WAVLVCLCIM LAALLMGIFP LFSSL
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