Gene PputGB1_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0163 
Symbol 
ID5867851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp168538 
End bp169845 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content62% 
IMG OID641545236 
ProductCitMHS family citrate/H+ symporter 
Protein accessionYP_001666415 
Protein GI167031184 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCT TCCTCGGCTT TGCCATGGTC ATCACCTTCA TGTACCTGAT CATGACCAAG 
CGCCTGTCGG CCTTGATCGC GCTGATCCTG GTACCGATCC TGTTCGCCCT GTTCGGTGGT
TTTTCCGCCA AAATCGGCCC CATGATGCTC GAAGGCATCA GCAAGCTCGC GCCAACCGGC
GTGATGCTGA TGTTCGCCAT TCTCTACTTC GCCCTGATGA TCGACTCCGG CCTGTTCGAC
CCGGCCGTGC GCAAGATCCT CAAACTGGTC AAGGGCGACC CGCTGAAAGT CTCGGTCGGC
ACCGCTGTAC TGGCCCTGGT GGTCTCGCTC GACGGTGACG GCGCCACCAC CTACATGATC
TGCTGTGCCG CTATGCTGCC GATGTACAGC CGTCTGGGCA TGAGCCCGCG GATCATGGCC
GGCCTGATCA TCCTCGCCGG CGGGGTGATG AACATGACCC CGTGGGGTGG CCCGACCGCC
CGCGCTGCCA GCGCCCTGCA CGTAGACCCA TCGGACATCT TCGTGCCGAT GATCCCGGCC
ATGCTGTTCG GTGTGCTGGC GATCCTGGCC ATCGCCTACA TGTACGGCAA GCGTGAACGT
GCTCGCCTAG GCGAACTGCA CCTGCCGACC GACGACATCG ACCACAGTGA AATCACTGTC
TCGCAATACC CTGACGCACG CCGGCCCAAG CTGCTGTACT TCAACGGTGC ACTGACCGCT
GCCCTGATGG TCGCACTGAT CGCCGGTGTA CTGCCGCTGC CGGTGCTGTT CATGATCGCC
TTCAGCATCG CGATGATCGT CAACTACCCA TGCCTGCAGC AGCAGAAGGA CCGCATCGCC
GCCCACGCAG GCAGCGTACT GGCCGTGACC GGGCTGATCT TCGCCGCAGG CATCTTTACC
GGCATCCTGT CCGGTACCGG CATGGTCGAC GCCATGTCCA AGAGCCTGCT GGCGGTCATC
CCCGAAGCGC TGGGCCCTTA CCTGGCGGTG ATCACCGCGA TCGTGAGCAT GCCGTTCACC
TTCTTCATGT CCAACGACGC GTTCTACTAC GGCGTGCTGC CAGTGCTGGC CGAAGCCGCC
AGCCATTACG GCATCACCCC GGTAGAGATG GCCCGTGCGT CGATCGTCGG GCAGCCAGTA
CACCTGCTCA GCCCGCTGGT ACCCTCCACC TACCTGCTGG TGGCCCTGGC CGGTATCGAA
TTTGGCGACC ATCAGCGCTT TACACTCAAG TGGGCAGTGT TGGTGTGCCT GTGCATAATG
CTCGCCGCAC TGCTGATGGG CATTTTCCCG CTGTTCAGTA GTCTTTAA
 
Protein sequence
MLTFLGFAMV ITFMYLIMTK RLSALIALIL VPILFALFGG FSAKIGPMML EGISKLAPTG 
VMLMFAILYF ALMIDSGLFD PAVRKILKLV KGDPLKVSVG TAVLALVVSL DGDGATTYMI
CCAAMLPMYS RLGMSPRIMA GLIILAGGVM NMTPWGGPTA RAASALHVDP SDIFVPMIPA
MLFGVLAILA IAYMYGKRER ARLGELHLPT DDIDHSEITV SQYPDARRPK LLYFNGALTA
ALMVALIAGV LPLPVLFMIA FSIAMIVNYP CLQQQKDRIA AHAGSVLAVT GLIFAAGIFT
GILSGTGMVD AMSKSLLAVI PEALGPYLAV ITAIVSMPFT FFMSNDAFYY GVLPVLAEAA
SHYGITPVEM ARASIVGQPV HLLSPLVPST YLLVALAGIE FGDHQRFTLK WAVLVCLCIM
LAALLMGIFP LFSSL