Gene PputGB1_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0135 
Symbol 
ID5867823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp137521 
End bp138477 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID641545208 
Productperiplasmic solute binding protein 
Protein accessionYP_001666387 
Protein GI167031156 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.972392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGT TATTATGTTA CCTGTTTCTG ACGACTCGAG TATCCACCGT GTCCCGATTC 
CTAGCTCTGT TTGTCGCTTT CATTGCATTT TCCGCCCAGG CCGATGTGCG CGTGCTCACC
AGTATCAAGC CCCTGCAGCA GATTGCCGCT GCCGTGCAGG ATGGCATTGG CAGCCCTGAC
GTCTTGCTGC CACCAGGCGC TTCGCCGCAC CACTACGCGC TGCGCCCGTC CGATGTACGG
CGGGTGGGTG ATGCCGACCT GCTGTACTGG ATCGGCCCGG ACATGGAGAA CTTCCTGCCG
CGTGTCTTGG CTAGCCGCAG CAAGGCCACC GTGGCCGTGC AGTCGCTGAC GGGCATGAAG
CTGCGTCACT TTGGCGAGGA CAGCCACTCC CATGAGGAAG AAAGCCACGA CGACCATGAC
CATGATCACC GGCCGGGCAG CCTGGATGCG CACTTGTGGC TATCGTCGGT CAATGCGCGG
GTAATCGCGG CAAAAATGGC GGCTGATCTG GCCCAGGTCG ACCCGGCCAA TGCGGCTCGC
TACCAGAGCA ACCTGAAGGC CTTCGACGAG CGTCTGGATG CACTGGATGC GCGTATCAAG
GCGCGGGTGG ACGGTATTGC CGGCAAACCT TATTTCGTGT TCCACGAAGC GTTCGATTAC
TTCGAGGCTG AATATGGTTT GAAGCACACC GGCGTATTCA GCGTGGCGTC CGAGGTGCAG
CCTGGGGCGC AACATGTGGC GGCCATGCGC AAGCGCCTGC AGGAAGTGGG CAAGACCTGT
GTGTTCAGCG AGCCGCCACT GCGACCGCGC TTGGCCGAGA CCTTGACCGC CGGGCTGCCG
GTGCGCCTGG CCGAGCTGGA TGCGCTGGGC GGAACAGACC CGGTGGATGG CAAGGGCTAT
GAGCGCTTGC TGGAAAAGCT GGGCGGCGAC CTGGCTGGGT GCCTGGAACA GCTCTAA
 
Protein sequence
METLLCYLFL TTRVSTVSRF LALFVAFIAF SAQADVRVLT SIKPLQQIAA AVQDGIGSPD 
VLLPPGASPH HYALRPSDVR RVGDADLLYW IGPDMENFLP RVLASRSKAT VAVQSLTGMK
LRHFGEDSHS HEEESHDDHD HDHRPGSLDA HLWLSSVNAR VIAAKMAADL AQVDPANAAR
YQSNLKAFDE RLDALDARIK ARVDGIAGKP YFVFHEAFDY FEAEYGLKHT GVFSVASEVQ
PGAQHVAAMR KRLQEVGKTC VFSEPPLRPR LAETLTAGLP VRLAELDALG GTDPVDGKGY
ERLLEKLGGD LAGCLEQL