Gene PputGB1_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0134 
Symbol 
ID5867822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp137017 
End bp137502 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID641545207 
Productferric uptake regulator family protein 
Protein accessionYP_001666386 
Protein GI167031155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.74995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.745544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA CGCCGCTGGC CAACCGTCCT CACGATCACT CCCATTGCGT ACACAGCGCA 
CTGGCTGAAG CCGACGCCTT GTGCACCCGC CTGGGCCTGC GCCTGACCGC GCTGCGCCGC
CGAGTGCTGG AGCTGGTGTG GCAAAGCCAC AAGCCACTGG GCGCCTACGA CATCCTTGCC
GTGCTCAGCG AGCAGGACGG CCGCCGCGCC GCCCCGCCCA CGGTGTACCG CGCGCTGGAC
TTCCTGCTGG AAAACGGCCT GGTGCACCGC ATCGCCTCGC TCAACGCCTT CATCGGCTGC
AGCCACCCCG AGCATGTGCA TCAAGGCCAG TTCCTGATTT GCCGCGCCTG CCATGTGGCC
ATCGAGCTGG AGCAGAGCAG CATCAGCGAT GCCATCATCG ACAGCGCCAA AGGCGTGGGC
TTCACGGTCG AGACCCAGAC CGTGGAAGTG GTCGGGCTGT GCGGCAGCTG CCGGAGCGCG
GCATGA
 
Protein sequence
MSITPLANRP HDHSHCVHSA LAEADALCTR LGLRLTALRR RVLELVWQSH KPLGAYDILA 
VLSEQDGRRA APPTVYRALD FLLENGLVHR IASLNAFIGC SHPEHVHQGQ FLICRACHVA
IELEQSSISD AIIDSAKGVG FTVETQTVEV VGLCGSCRSA A