Gene PputGB1_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0132 
Symbol 
ID5867820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp135472 
End bp136254 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID641545205 
ProductABC-3 protein 
Protein accessionYP_001666384 
Protein GI167031153 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.493035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.654734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TTCTTCTCTA CGCCCTGCTT GCCGGTTTGT CCCTGGCGCT GGTCGCCGGC 
CCGCTGGGCT CCTTCGTGGT GTGGCGGCGC ATGGCCTACT TTGGCGACAC CTTGTCCCAT
GCCGCCTTGC TCGGTGTTGC CTTGGGCTTC GCCCTGGACG TCAGCCCAGC GCTGGCGGTA
ACCGTGGGCT GCCTGTTGCT GGCAATCCTG CTGGTGACCT TGCAGCAACG CCAGCCGCTG
GCCTCCGACA CCCTGCTCGG CATCCTCGCC CCCAGCACCC TGTCGCTGGG CCTGGTGGTA
CTGAGCTTCA TGCACGATGT GCGCATCGAC CTGATGGCGT ACCTGTTCGG CGACCTGCTG
GCCATCAGCA CCACCGACCT GGCCTGGATC CTCGGCGGCA GTGCGCTGGT GCTGCTGTTG
CTCGCCGTGC TGTGGCGGCC GCTGCTGGCG GTTACCGTGC ACGAAGAGCT GGCCATGGTC
GAAGGCCTGC CTGTGGCCGG CCTGCGCCTG GCGCTCATGC TGTTGATTGC GGTGGTAATT
GCCGTGGCCA TGAAGATCGT CGGTGTGCTG CTGATCACCT CGCTGCTGAT CATCCCTGCG
GCTGCGGCAC AGCGTCACGC CCGCTCGCCA GAGCAGATGG CCCTTGGCGC CAGCCTGCTG
GGCGTTACCG CTGTGTGCGG TGGCCTGGCC ATGTCCTGGT TCAAGGACAC CCCCGCCGGC
CCGTCGATCG TGGTCTGCGC GGCGGTGCTA TTCTTGCTGA GCCTGGCCCT GCCAAAACGC
TGA
 
Protein sequence
MADFLLYALL AGLSLALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGF ALDVSPALAV 
TVGCLLLAIL LVTLQQRQPL ASDTLLGILA PSTLSLGLVV LSFMHDVRID LMAYLFGDLL
AISTTDLAWI LGGSALVLLL LAVLWRPLLA VTVHEELAMV EGLPVAGLRL ALMLLIAVVI
AVAMKIVGVL LITSLLIIPA AAAQRHARSP EQMALGASLL GVTAVCGGLA MSWFKDTPAG
PSIVVCAAVL FLLSLALPKR