Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0132 |
Symbol | |
ID | 5867820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 135472 |
End bp | 136254 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545205 |
Product | ABC-3 protein |
Protein accession | YP_001666384 |
Protein GI | 167031153 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.493035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.654734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TTCTTCTCTA CGCCCTGCTT GCCGGTTTGT CCCTGGCGCT GGTCGCCGGC CCGCTGGGCT CCTTCGTGGT GTGGCGGCGC ATGGCCTACT TTGGCGACAC CTTGTCCCAT GCCGCCTTGC TCGGTGTTGC CTTGGGCTTC GCCCTGGACG TCAGCCCAGC GCTGGCGGTA ACCGTGGGCT GCCTGTTGCT GGCAATCCTG CTGGTGACCT TGCAGCAACG CCAGCCGCTG GCCTCCGACA CCCTGCTCGG CATCCTCGCC CCCAGCACCC TGTCGCTGGG CCTGGTGGTA CTGAGCTTCA TGCACGATGT GCGCATCGAC CTGATGGCGT ACCTGTTCGG CGACCTGCTG GCCATCAGCA CCACCGACCT GGCCTGGATC CTCGGCGGCA GTGCGCTGGT GCTGCTGTTG CTCGCCGTGC TGTGGCGGCC GCTGCTGGCG GTTACCGTGC ACGAAGAGCT GGCCATGGTC GAAGGCCTGC CTGTGGCCGG CCTGCGCCTG GCGCTCATGC TGTTGATTGC GGTGGTAATT GCCGTGGCCA TGAAGATCGT CGGTGTGCTG CTGATCACCT CGCTGCTGAT CATCCCTGCG GCTGCGGCAC AGCGTCACGC CCGCTCGCCA GAGCAGATGG CCCTTGGCGC CAGCCTGCTG GGCGTTACCG CTGTGTGCGG TGGCCTGGCC ATGTCCTGGT TCAAGGACAC CCCCGCCGGC CCGTCGATCG TGGTCTGCGC GGCGGTGCTA TTCTTGCTGA GCCTGGCCCT GCCAAAACGC TGA
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Protein sequence | MADFLLYALL AGLSLALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGF ALDVSPALAV TVGCLLLAIL LVTLQQRQPL ASDTLLGILA PSTLSLGLVV LSFMHDVRID LMAYLFGDLL AISTTDLAWI LGGSALVLLL LAVLWRPLLA VTVHEELAMV EGLPVAGLRL ALMLLIAVVI AVAMKIVGVL LITSLLIIPA AAAQRHARSP EQMALGASLL GVTAVCGGLA MSWFKDTPAG PSIVVCAAVL FLLSLALPKR
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