| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0125 |
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| Symbol | |
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| ID | 5867813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 128018 |
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| End bp | 128911 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545198 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001666377 |
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| Protein GI | 167031146 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.350123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0256302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACGC TTCTGAGCGC AAGGCGGGCC AGCTGGCGCG ATTACCTGGA GCTGACCAAG
CCCAAGGTGG TGGTGCTGAT GCTGATCACC TCGCTGGCAG GCATGTTCCT GGCCACCCGC
GCGGGTGTGA GCTGGAGCGT GTTGCTGTTC GGCAACCTGG GGATCGGCTT GTGCGCGGGT
GGCGCTGCGG TGGTCAACCA TGTGGTGGAC CGACGCATCG ATGCACTGAT GGCACGTACC
CACAAGCGGC CGCTGGCCCA GGGTCGGGTC GAGCCGCTGC CGGCATTGCT GTTCGCCCTG
GCACTGGCGC TGCTGGGCAT GGCTCTGCTG CTGGCGTTCA CCAACGCCCT CACGGCCTGG
CTTACCCTGG CCTCGCTACT GGGCTATGCG GTGCTCTACA CCGGCTTTCT CAAGCGCGCC
ACGCCACAGA ACATCGTCAT CGGCGGCCTG GCCGGCGCCG CCCCGCCGTT GCTTGGTTGG
GTGGCGGTAA GCGGCCATGT CAGCGCTGAG CCCTTGCTGC TGGTGCTGAT CATCTTCGCC
TGGACCCCGC CGCACTTCTG GGCGCTGGCC ATCCACCGCA AGGAGGAGTA CGCCAAGGCC
GATATCCCGA TGTTGCCGGT GACCCATGGT GAGCGCTACA CCAAGCTGCA TATCTTGCTG
TACACGCTGA TTCTGCTGGC GGTAAGCCTG CTGCCGTATG CCATCCACAT GAGCGGCCCG
CTGTACCTGG CCTGTGCCCT GGTCTTGGGC CTGCGCTTCC TGCAATGGGC CTGGGTGTTG
TACCGTGGCA GCCGGCCGCA CGCGGCAATC GGCACCTTCA AGTACTCTAT CGCCTACTTG
TTCGCGCTGT TCATCGCGTT GCTCCTTGAC CACTACCTGT TGCTGAACCT ATGA
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| Protein sequence | MATLLSARRA SWRDYLELTK PKVVVLMLIT SLAGMFLATR AGVSWSVLLF GNLGIGLCAG
GAAVVNHVVD RRIDALMART HKRPLAQGRV EPLPALLFAL ALALLGMALL LAFTNALTAW
LTLASLLGYA VLYTGFLKRA TPQNIVIGGL AGAAPPLLGW VAVSGHVSAE PLLLVLIIFA
WTPPHFWALA IHRKEEYAKA DIPMLPVTHG ERYTKLHILL YTLILLAVSL LPYAIHMSGP
LYLACALVLG LRFLQWAWVL YRGSRPHAAI GTFKYSIAYL FALFIALLLD HYLLLNL
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