Gene PputGB1_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0123 
Symbol 
ID5867811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp126363 
End bp126944 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content66% 
IMG OID641545196 
Producthypothetical protein 
Protein accessionYP_001666375 
Protein GI167031144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.242172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0223002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CCACTCCACT GGACCTGCCT GAACGTAGCA AGCCCCGAGC CCGCGGGCGT 
TTGCAGCTGT TGCTGATTCT GCTGGTAGTG CTCGGGCCGA TGATCCTGGC CACCAGCATG
TACAAACTCA ACTTCTGGGT ACCGGAAGGC CGCAGCTACC ACGGCGCGAT GATCGGCAAC
GGGGAAAGCC GTGCCGATCT TGGCGTGGCC GGCGAGGACG AGCGCTGGCA GTTGCTGGTC
AGCGCGCCTC AGGCCTGTGC CGAAGACTGC CAGCGGCTGG TGTACCTGGC CCGGCAGATT
CAGGTCGGCC TGGGCCGCGA TGCCAGCCGC GCCAGCCATG CACTGGCCGC TGCCCAGCCG
CTGAGCGCCG ACTACCAGGC GCTGCTCGGC CGCGAGTACC CGCAGCTGCA GCGCTACCCG
CTGGATGCGC AACGTTACCA GCAGAAGGTT GCCGAGCCCG GCCCGCAGCT GTGGATTGTC
GACCCGCACG GCAACCTGGT GCTGCGCTAC GACGGCAAGG TCAACGGCAA GCATGTGCTG
GATGACCTGC GCCACCTGCT CAAGCTGTCC AATATCGGCT AG
 
Protein sequence
MATATPLDLP ERSKPRARGR LQLLLILLVV LGPMILATSM YKLNFWVPEG RSYHGAMIGN 
GESRADLGVA GEDERWQLLV SAPQACAEDC QRLVYLARQI QVGLGRDASR ASHALAAAQP
LSADYQALLG REYPQLQRYP LDAQRYQQKV AEPGPQLWIV DPHGNLVLRY DGKVNGKHVL
DDLRHLLKLS NIG