Gene PputGB1_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0122 
Symbol 
ID5867810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp125657 
End bp126394 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID641545195 
Producthypothetical protein 
Protein accessionYP_001666374 
Protein GI167031143 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.907496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0246667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCGT TTCGCCCAGG CTGGGTACCG ACCCTGGTGG TGCTTGCGCT GCTGCCGGGG 
CTGATTGCCC TTGGCTGCTG GCAACTCGGC CGAGCCGAAG AAAAGCGTGG GCTGTTGGCC
AGCTATGCCG AGCGACGGGT CGAGGCGCCG CTGGCCGCAG CCCAGCTGAC GTCCAGTGAC
GACAACGCGT TCCGCCGCGT GCATTTGTAT GGCCGCTTCG ATGCCGAGCA CAGCCTGCTG
CTGGACAACC GCATGCGTGA CGGCCAGGCC GGTGTCGAAC TGCTGCAACC CTTCCATGAC
CAGGCCAGTG GCCTGTGGTT GCTGGTCAAC CGCGGTTGGC TGCCATGGCC GGACCGCCGG
GTGCCGGTGC ATTTCGAAAC CCCGTCCCAG GCCTTGGCGC TGGACGCGTC CGTGTATGTC
TCGCCCGGCA GCACCTTCCA GTTGCATCCC GACCCTGAAG GCGGCCAATG GCCGCATTTG
CTTACCGCCA TTGATGCCGT GCAGCTATGG CCGCAGCTCG ACCGCGAAGG CTTCGCCCAC
GAACTGCGCC TGGAGCCCGG CCCGGCGACC TATCGCCTGG ACTGGCCGGT CGTGGCCATG
GGCCCGGAAA AACACCTGGG CTACGCCGTG CAGTGGTTCG CCCTGGCGAC CGCTCTGGTT
CTGCTCTACC TCTATTTCGG CTGGCACCAA AACAAGGAGA AACGCCATGG CCACCGCCAC
TCCACTGGAC CTGCCTGA
 
Protein sequence
MRPFRPGWVP TLVVLALLPG LIALGCWQLG RAEEKRGLLA SYAERRVEAP LAAAQLTSSD 
DNAFRRVHLY GRFDAEHSLL LDNRMRDGQA GVELLQPFHD QASGLWLLVN RGWLPWPDRR
VPVHFETPSQ ALALDASVYV SPGSTFQLHP DPEGGQWPHL LTAIDAVQLW PQLDREGFAH
ELRLEPGPAT YRLDWPVVAM GPEKHLGYAV QWFALATALV LLYLYFGWHQ NKEKRHGHRH
STGPA