Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0122 |
Symbol | |
ID | 5867810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 125657 |
End bp | 126394 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545195 |
Product | hypothetical protein |
Protein accession | YP_001666374 |
Protein GI | 167031143 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.907496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0246667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCCGT TTCGCCCAGG CTGGGTACCG ACCCTGGTGG TGCTTGCGCT GCTGCCGGGG CTGATTGCCC TTGGCTGCTG GCAACTCGGC CGAGCCGAAG AAAAGCGTGG GCTGTTGGCC AGCTATGCCG AGCGACGGGT CGAGGCGCCG CTGGCCGCAG CCCAGCTGAC GTCCAGTGAC GACAACGCGT TCCGCCGCGT GCATTTGTAT GGCCGCTTCG ATGCCGAGCA CAGCCTGCTG CTGGACAACC GCATGCGTGA CGGCCAGGCC GGTGTCGAAC TGCTGCAACC CTTCCATGAC CAGGCCAGTG GCCTGTGGTT GCTGGTCAAC CGCGGTTGGC TGCCATGGCC GGACCGCCGG GTGCCGGTGC ATTTCGAAAC CCCGTCCCAG GCCTTGGCGC TGGACGCGTC CGTGTATGTC TCGCCCGGCA GCACCTTCCA GTTGCATCCC GACCCTGAAG GCGGCCAATG GCCGCATTTG CTTACCGCCA TTGATGCCGT GCAGCTATGG CCGCAGCTCG ACCGCGAAGG CTTCGCCCAC GAACTGCGCC TGGAGCCCGG CCCGGCGACC TATCGCCTGG ACTGGCCGGT CGTGGCCATG GGCCCGGAAA AACACCTGGG CTACGCCGTG CAGTGGTTCG CCCTGGCGAC CGCTCTGGTT CTGCTCTACC TCTATTTCGG CTGGCACCAA AACAAGGAGA AACGCCATGG CCACCGCCAC TCCACTGGAC CTGCCTGA
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Protein sequence | MRPFRPGWVP TLVVLALLPG LIALGCWQLG RAEEKRGLLA SYAERRVEAP LAAAQLTSSD DNAFRRVHLY GRFDAEHSLL LDNRMRDGQA GVELLQPFHD QASGLWLLVN RGWLPWPDRR VPVHFETPSQ ALALDASVYV SPGSTFQLHP DPEGGQWPHL LTAIDAVQLW PQLDREGFAH ELRLEPGPAT YRLDWPVVAM GPEKHLGYAV QWFALATALV LLYLYFGWHQ NKEKRHGHRH STGPA
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