Gene PputGB1_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0113 
Symbol 
ID5867801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp116160 
End bp117218 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID641545186 
Productradical SAM domain-containing protein 
Protein accessionYP_001666365 
Protein GI167031134 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000412834 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCTC CAGCACCACT AAAGGGCCGT GGCACGGCAC ACAATCCGCA CAACCGTTTT 
GCCCCCAGCC ATTCGCTGGT AGAGGACGAC GGCTGGTATC AGGAAGTGCC GCAGACCCAA
GGCACCGAGG TGCGTAGCGA AACGGCGAAA TCGGTCATCA CCCGCAACAC CTCCCCCGAC
CTGCCCTTCG ACCGCTCCAT CAACCCTTAC CGCGGCTGCG AGCATGGCTG CATCTACTGC
TATGCCCGCC CCTCCCATGC CTATTGGGAC CTCTCCCCCG GCTTGGACTT CGAAACCAAG
CTGATCGCCA AGACCAACGC CGCCGAAGTG CTCGCGCAAC AGCTGAGCAA ACCGGGTTAC
GTGTGCGCGC CAATCAATCT GGGTTCCAAT ACCGACCCGT ACCAGCCGAT CGAGCGGGAA
CAGATGCTGA CCCGGCGTCT GCTGGAAGTG TTGCTGCGTT TTCGTCACCC GGTGACCATC
GTGACCAAGG GCTCGCTGGT GTTGCGTGAC CTCGATCTGC TGGCAGAGAT GGCCCGCCAG
CGCCTGGCAC GGGTAATGAT CAGCCTGACC ACACTGGACG ACGATCTCAA GCGGGTGCTG
GAGCCACGGG CGGCGTCACC CAATGCCCGG TTGAGGGCCA TCCGCGTGTT GCGCGAGGCG
GGTGTGCCGG TAGGTGTGTT GTGTTCGCCG ATGATTCCGA TGATCAACGA CAGTGAGCTG
GAGCGCTTGC TGGAGGCTGC CAAGGACGCT GGCGCACAGA GTGCGGCCTA CATGATGTTG
CGCCTGCCGC TGGAAGTGGC GCCGTTGTTC GAGCAATGGC TGCAGGACCA TTACCCGCAG
CGGGCGGCGC ATGTATTGAG CCTGATCCGC CAGAGCCGGG GGGGCGAGCT GTATGACAGC
CGGTTTGGCA CGCGCATGCG TGGCGAGGGT GTGTTTGCCG AGCTGCTGGG GCAGCGTTTT
GCCAAGGCCA TGAAGCGGCT GGAATTCGAA GGCCGGGAAG CGCAGGGGCT GGATTGCTCG
GCCTTCTGTC CGCCGGGTGG GCAGATGGCC CTGTTCTGA
 
Protein sequence
MNPPAPLKGR GTAHNPHNRF APSHSLVEDD GWYQEVPQTQ GTEVRSETAK SVITRNTSPD 
LPFDRSINPY RGCEHGCIYC YARPSHAYWD LSPGLDFETK LIAKTNAAEV LAQQLSKPGY
VCAPINLGSN TDPYQPIERE QMLTRRLLEV LLRFRHPVTI VTKGSLVLRD LDLLAEMARQ
RLARVMISLT TLDDDLKRVL EPRAASPNAR LRAIRVLREA GVPVGVLCSP MIPMINDSEL
ERLLEAAKDA GAQSAAYMML RLPLEVAPLF EQWLQDHYPQ RAAHVLSLIR QSRGGELYDS
RFGTRMRGEG VFAELLGQRF AKAMKRLEFE GREAQGLDCS AFCPPGGQMA LF