Gene PputGB1_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0111 
Symbol 
ID5867799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp113714 
End bp115801 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content64% 
IMG OID641545184 
Productoligopeptidase A 
Protein accessionYP_001666363 
Protein GI167031132 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000602107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGCAGT GTTTCTTCTG CCAAGGTATC CAAACCGTGA CTGCGAACAA CCCGCTTCTG 
CAATCCCACG ATCTGCCGCC CTTCTCGCAA ATTCGTGCCG AACACGTGTT GCCGGCGATC
GAAGCGATCC TGGCCGACAA CCGTAAAGCC ATTGCCGAGA TCCTCGAAAA GCAGGGCAAG
AACCCCACCT GGGCCGGCCT GGTGCTGGCC ATGGACGAAC TGAACGACCG CCTGGGCGCC
GCCTGGAGCC CGGTCAGCCA CCTTAACGCG GTGTGCAACA GCGCGGAGCT GCGCGAGGCC
TACGAGTCAT GCCTGCCGGC GTTGAGCGCC TACTCTACCG AACTGGGCCA GAACCGTGCG
CTGTTCGAAG CCTACCAGGC ACTGATCGAC AGCCCGGAGG CCGCCGGCTT CGACGTGGCG
CAAAAGACTA TCCTCGAGCA TGCCCTGCGT GACTTCCGCC TGTCGGGTAT CGACCTGCCG
GCGGACAAGC AGCAGCGCTA CGCCGAAGTG CAGAGCAAAC TCAGCGAGCT GGGCAGCCGC
TTCTCCAACC AGCTGCTCGA TGCCACCCAG GCCTGGACCA AGCACGTTAC CGATGAAGCC
GCACTGGCCG GCCTGACCGA CTCGGCCAAG GCGCAGATGG CCGCCGCTGC CCAAGCCAAG
GGCCTCGACG GATGGCTGAT CACGTTGGAG TTCCCCAGCT ACTACGCGGT GATGACCTAC
GCCAGCGACC GCGCCCTGCG CGAAGAGCTA TACGCCGCTT ACTGCACCCG CGCCTCGGAC
CAGGGCCCGA ATGCCGGCCA GTTCGACAAC GGTCCGGTGA TGGGCGAAAT CCTCGATCTG
CGTCAGGAAC TGGCCGAGCT GCTTGGCTAC AAGAACTACG CCGAGCTGAG CCTGGCCACC
AAGATGGCCG AGTCCAGCGA CCAGGTGCTG AGCTTCCTGC GAGACCTGGC CAAGCGCTCC
AAGCCGTTCG CCGCCCAGGA CCTGCAACAG CTCAAGGCCT ACGCCGCCGA ACAAGGCTGC
CCTGAACTGG CCAGCTGGGA CACTGGCTAC TTTGGCGAGA AGCTGCGCGA GCAGCGCTAC
AGCGTGTCGC AGGAAGCCCT GCGTGCCTAT TTCCCGATCG ACAAGGTGCT GGGCGGTCTG
TTCAGCATCG TGCAGCGCCT GTACGGCATC GAAATCGCCG AACTCAAGGG CTTCGACAGC
TGGCACCCAG ACGTACGCTT GTTCGAGATC AAGGAAAACG GCCAGCACGT CGGCCGCTTC
TTCTTCGACC TGTACGCCCG CGCCAACAAG CGTGGTGGCG CCTGGATGGA TGGCGCCCGT
GACCGTCGCC GCACGGCCGG CGGCCAGCTG CAGAGCCCGG TGGCCAACCT GGTGTGCAAC
TTCACCCCGG CTGCACCCGG CAAGCCGGCG CTGCTGACCC ACGATGAAGT AACCACCCTG
TTCCACGAGT TCGGCCACGG CCTGCACCAC ATGTTGACCC GCATCGAACA CGCCGGGGTT
TCCGGCATCA ATGGCGTGGC CTGGGATGCG GTCGAACTGC CGAGCCAGTT CATGGAAAAC
TGGTGCTGGG AGCCGGAAGG CCTGGCACTG ATCTCCGGGC ACTACGAAAC GGGTGCTGCC
CTGCCCCAGG ACCTGCTGGA CAAGATGCTG GCGGCTAAAA ACTTCCAGTC GGGCATGATG
ATGGTGCGCC AGCTGGAGTT TTCGCTGTTC GACTTCGAAC TGCACGCCAG CCATGGCGAC
GGTCGCAGCG TGCTGCAGGT GCTCGAAGGC GTGCGCGACG AGGTATCGGT CATGCGCCCA
CCGGCGTATA ACCGCTTCCC CAACAGCTTT GCGCATATTT TTGCGGGCGG TTACGCAGCG
GGCTACTACA GCTACAAGTG GGCTGAAGTG CTGTCGGCCG ACGCTTTCTC GCGTTTCGAA
GAAGAAGGTG TTCTCAATGC CGAGACTGGC CGCGCCTTCC GCGAGGCGAT CCTGGCCCGT
GGTGGGTCGC GCGAGCCGAT GGAGCTGTTC GTCGACTTCC GTGGCCGTGA GCCTTCCATC
GATGCATTGC TGCGCCACAG TGGCCTCACC GAGGACGCTG CGGCATGA
 
Protein sequence
MGQCFFCQGI QTVTANNPLL QSHDLPPFSQ IRAEHVLPAI EAILADNRKA IAEILEKQGK 
NPTWAGLVLA MDELNDRLGA AWSPVSHLNA VCNSAELREA YESCLPALSA YSTELGQNRA
LFEAYQALID SPEAAGFDVA QKTILEHALR DFRLSGIDLP ADKQQRYAEV QSKLSELGSR
FSNQLLDATQ AWTKHVTDEA ALAGLTDSAK AQMAAAAQAK GLDGWLITLE FPSYYAVMTY
ASDRALREEL YAAYCTRASD QGPNAGQFDN GPVMGEILDL RQELAELLGY KNYAELSLAT
KMAESSDQVL SFLRDLAKRS KPFAAQDLQQ LKAYAAEQGC PELASWDTGY FGEKLREQRY
SVSQEALRAY FPIDKVLGGL FSIVQRLYGI EIAELKGFDS WHPDVRLFEI KENGQHVGRF
FFDLYARANK RGGAWMDGAR DRRRTAGGQL QSPVANLVCN FTPAAPGKPA LLTHDEVTTL
FHEFGHGLHH MLTRIEHAGV SGINGVAWDA VELPSQFMEN WCWEPEGLAL ISGHYETGAA
LPQDLLDKML AAKNFQSGMM MVRQLEFSLF DFELHASHGD GRSVLQVLEG VRDEVSVMRP
PAYNRFPNSF AHIFAGGYAA GYYSYKWAEV LSADAFSRFE EEGVLNAETG RAFREAILAR
GGSREPMELF VDFRGREPSI DALLRHSGLT EDAAA