| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0109 |
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| Symbol | |
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| ID | 5867797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 112428 |
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| End bp | 113102 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545182 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001666361 |
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| Protein GI | 167031130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000398417 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCCGA CTACCGAGAC GAACATGCAT CAGCAAAATA TCCTCTTCGA CCTCGACGGC
ACCCTGACCG ACCCGCGCCT GGGCATCACC CGCTCGATCC AGTACGCCCT GGCCAAGCTG
GGTATCGACG AACCGGACCT GGCCCGCCTC GAGCACTTCA TCGGCCCGCC CCTGCTTCAG
GCTTTCATGC AGTTCTACAG CTTCGACGAA GCCAAGGCCT GGGATGCGGT GAATTTCTAC
CGGGAGCGCT TTCGCGTAAC CGGGTTGTAC GAAAACCTGG TGTTCGAAGG CGTGCCGGCG
TTGCTTGAAA CCCTGAACGG GCAGGGCCGT ACGCTGTACA TCGCCACCTC CAAACCTTGG
GAATTTGCCC GGGAAATCGC CCGGCACTTC GCCTTCGACC ACCACTTCAA GGTGATCTAC
GGCAGCGAGC TGGACGGCAC GCGCACCAAC AAGGTCGAGC TGATTCGCCA CCTGCTCGAT
GAAGAAGGGC TGGACCCGGC GCAGACGCTG ATGATCGGTG ACCGCAAGCA TGACCTGATT
GGCGCGCGCA GCAATGGCTT GCAGGCAGTG GCGGTGGGGT ATGGGTTTGG TAGCCAGGAA
GAGTTGATGG CGGAGGAGCC CGCTTTCCAT TTCGCTACGG TAGCCGAGCT GCATCAGGCT
TTCAGCAAGG GTTAA
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| Protein sequence | MNPTTETNMH QQNILFDLDG TLTDPRLGIT RSIQYALAKL GIDEPDLARL EHFIGPPLLQ
AFMQFYSFDE AKAWDAVNFY RERFRVTGLY ENLVFEGVPA LLETLNGQGR TLYIATSKPW
EFAREIARHF AFDHHFKVIY GSELDGTRTN KVELIRHLLD EEGLDPAQTL MIGDRKHDLI
GARSNGLQAV AVGYGFGSQE ELMAEEPAFH FATVAELHQA FSKG
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