Gene PputGB1_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0100 
Symbol 
ID5867788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp107377 
End bp107700 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content59% 
IMG OID641545173 
Productprotein of unknown function DUF883 ElaB 
Protein accessionYP_001666352 
Protein GI167031121 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000513351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCGCA ACTCGCTGCG TAAAACGTCC CTGGAAAGCA TGGAAGCGGA GATCGAGAGC 
CTTCTGAAAA GCCTGGAGAA CCTCAAGCAC GATGCGTCGG AAGAATCCCA GAAGTCGGTG
AAGGCAATCC GCAGCAACGC CGAAAGCGCG CTGAAACACT CGCGCAGCCT GCTCAGCGAT
GCTTATGAGG AAGTGAAGAC CCGCACCCGC CAGACCGGCA TCGCCACCCG TGATTACGCC
CAGGAACACC CGATTACAAC GGCAGGCGTA GCCATTGGTG CCCTCGGTCT GCTGGCGGCC
TATCTGTTGT CGCGTCGCAA CTAA
 
Protein sequence
MHRNSLRKTS LESMEAEIES LLKSLENLKH DASEESQKSV KAIRSNAESA LKHSRSLLSD 
AYEEVKTRTR QTGIATRDYA QEHPITTAGV AIGALGLLAA YLLSRRN