| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0098 |
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| Symbol | |
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| ID | 5867786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 105156 |
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| End bp | 106373 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545171 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001666350 |
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| Protein GI | 167031119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000284084 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGT CCCAATACCG CCCCGGCCCC GACGCCAATG GCCTGTTCGG CTCGTTCGGC
GGCCGCTACG TGGCCGAAAC CCTGATGCCA CTGGTGCTGG ACCTGGCCCG CGAATACGAA
GCGGCCAAGG CAGACCCCAA GTTCCTTGAA GAGCTGGCCT ATTTCCAGCG CGACTACATC
GGCCGCCCCA ACCCGCTGTA CTTCGCCGAA CGCCTGACCG AGCACTGCGG CGGCGCGAAA
ATCTTCTTCA AGCGTGAAGA GCTCAACCAC ACCGGCGCGC ACAAGGTGAA CAACTGCATC
GGCCAGGTGC TGCTGGCCAA ACGCATGGGC AAGAAGCGCC TGATCGCCGA AACCGGCGCC
GGCATGCACG GTGTGGCTAC CGCCACCGTC GCCGCCCGCT TCGGCCTGCC TTGCGTGATC
TACATGGGCG CCACCGACAT CGAGCGCCAG CAGGCCAACG TGTTCCGCAT GAAACTGCTG
GGCGCCGAGA TCGTCCCGGT CACTGCCGGC ACCGGCACCC TCAAAGACGC CATGAACGAA
GCTCTGCGCG ACTGGGTGAC CAACGTCGAA GACACCTTCT ACCTGATCGG CACCGTGGCG
GGTCCACACC CGTACCCGGC CATGGTTCGC GACTTCCAGT CGATCATAGG CAAAGAAACC
CGCGCCCAGT TGCAAGAGAA GGAAGGCCGC CTGCCAGACA GCCTGGTTGC CTGCGTTGGC
GGTGGCTCCA ATGCCATGGG CCTGTTCCAT GAGTTTCTCG AAGAGCCGAG CGTGCAGATC
ATCGGCGTCG AAGCCGGTGG CCACGGCGTG CACACCGACA AGCACGCCGC CAGCCTGAAC
GGCGGCGTAC CGGGCGTACT GCACGGCAAC CGTACCTACC TGCTGCAAGA TGCAGACGGC
CAGATCACCG ACGCCCACTC GATTTCCGCA GGCCTCGACT ACCCAGGCAT CGGCCCGGAA
CACGCCTACC TGCACGAAGT GAAGCGCGTC GAATACGTCA GCATCACCGA TGACGAAGCG
CTGGATGCGT TCCACGCCAC CTGCCGCCTG GAAGGCATCA TCCCGGCCCT GGAAAGCTCT
CACGCCCTGG CCGAAGCGAT CAAGCGCGCA CCGAAGCTGC CCAAGGACCA CCTGATGGTC
GTGTGCCTGT CAGGCCGCGG CGACAAAGAC ATGCAAACCG TCATGAACCA CATGGCCGCC
CAGGAGAAAC AGGCATGA
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| Protein sequence | MTQSQYRPGP DANGLFGSFG GRYVAETLMP LVLDLAREYE AAKADPKFLE ELAYFQRDYI
GRPNPLYFAE RLTEHCGGAK IFFKREELNH TGAHKVNNCI GQVLLAKRMG KKRLIAETGA
GMHGVATATV AARFGLPCVI YMGATDIERQ QANVFRMKLL GAEIVPVTAG TGTLKDAMNE
ALRDWVTNVE DTFYLIGTVA GPHPYPAMVR DFQSIIGKET RAQLQEKEGR LPDSLVACVG
GGSNAMGLFH EFLEEPSVQI IGVEAGGHGV HTDKHAASLN GGVPGVLHGN RTYLLQDADG
QITDAHSISA GLDYPGIGPE HAYLHEVKRV EYVSITDDEA LDAFHATCRL EGIIPALESS
HALAEAIKRA PKLPKDHLMV VCLSGRGDKD MQTVMNHMAA QEKQA
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