| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0095 |
|---|
| Symbol | |
|---|
| ID | 5867783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 103291 |
|---|
| End bp | 103845 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545168 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001666347 |
|---|
| Protein GI | 167031116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000000456218 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACG CCGAAACCCC AGTGTACAAA CTGGTCTTGT TCGGGCCTGA AAGCAGCCTG
GGCAATGCCC TGATGGCCGA GCTGCTGTCG CGCCAGCACG AAGTCACCGC CGTGGTTGAT
GACCTCAACC GCCACACAGC GCGCCCGGGC CTGCACTTCA AGATAGGCGG GCTGCACGAT
GCCGACCAGG CTGAACAGGG CGCGGCAGGC GGCTCGGCAG TAATCGCCCT GCTATCGGCG
CTGGCGCCAG GTGACTTGCC GGGGCAAGCA CGCCTGAGCG AGGCACTGGT GGCGGGGCTT
GAGCGTACGA CTATACGCCG GCTGTTGCTG GTGGGCGATT TCGCTGTGCT GGATGAGCCG
GGCAAGTACA GCGAGGCAGA GCGGGAATGC GTGGACCATG TGGTTGATGG GTTGCAGCGC
AGTGCGTTGC GCTGGACCCT GATCAATACG CCGCAGGCGT TGCCCGATGA GGGGTGGGCA
CGTGTGGCGG CGGGGATGGC GGATATGCTG GAACTGGACC TGCACCGGGG CGAGCATCTG
AACTTCGTGG TCTAG
|
|---|
| Protein sequence | MKNAETPVYK LVLFGPESSL GNALMAELLS RQHEVTAVVD DLNRHTARPG LHFKIGGLHD
ADQAEQGAAG GSAVIALLSA LAPGDLPGQA RLSEALVAGL ERTTIRRLLL VGDFAVLDEP
GKYSEAEREC VDHVVDGLQR SALRWTLINT PQALPDEGWA RVAAGMADML ELDLHRGEHL
NFVV
|
|---|
| |