Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0085 |
Symbol | |
ID | 5867773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 91963 |
End bp | 93060 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545158 |
Product | DNA protecting protein DprA |
Protein accession | YP_001666337 |
Protein GI | 167031106 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.182517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000000000667659 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCCGTT ACCATTCGTC GCTCTGCCCG CCTGCCGAAC TTGAGGCGCG ATTACGTCTG CATCGCCTGC CCGAGACAGG ACTGCGACGT TTTCGCACCT TGCTCGATGC CTTCGGCAGT GCCTCTTGCG CGCTCAGTGC GCCCGGTGCG GCCTGGCGAG CGTTGGGCAT CCCGCAAGCC ACCATCGATG CCCGGCGCAG TGCCGAGGTA CGAGATGGGG CGCTGGCCGC AATGGCCTGG TTAGAGCGCC CGGGCCAGCA TTTGCTGATG TGGGACGACC CTGGCTACCC TGCCTTGCTG GCAGAAACCG ACGATGCCCC ACCGCTGCTT TTCGTTGCGG GTGAACCGGC CTTGCTCGAC CGCCCTCAGC TGGCCATCGT GGGCAGCAGA CGTGCTACAC CCCCGGCGCT CGACACTGCC CGGGCATTTT CCCGCTATCT CGCACAAGCC GGTTTCACCA TTACCAGCGG GCTGGCGGTA GGTGTCGACG GTGCCGCTCA TCGGGCCGCG TTGCAGGCCG GTGGGTGCAC GATTGCCGTG CTCGGTACGG GGCTGCAAAA ACTTTATCCA CAGCGCCATC ATGAGCTTGC GCAGGCGATG ATCGACAATG GCAGTGCGCT GGTTTCCGAG TATCCGCTGG ATGCCGGGCC ACTGCCCGGC AATTTCCCAC GGCGCAATCG CATCATCAGC GGCTTGTCGC TGGGCGTGCT GGTGGTAGAG GCCAGCCTGG CCAGCGGCTC GCTCATCACG GCGCGCCTGG CGGCCGAGCA AGGCCGCGAG GTGTATGCCA TTCCGGGTTC CATTCACCAC CCGGGGGCCA AGGGCTGTCA CCAGCTGATC CGTGATGGGG CGCTGCTGGT GGAAAGTGTG GAGCAGATCC TGGAAAGCCT GAAGGGTTGG CAGAACCTGC CGCCTGCAGT TGTGGACAGG TTCGAGCATC CCCTGCTTGC CCTGCTGCAT GCAGCACCGC AAACCAGCGA AAGCCTGGCG CACTGCAGCG AGCTGCCGTT GGCCGAGGTA CTGGCGCAGC TGACCGAGCT GGAGCTGGAC GGCCGGGTCA GCAATGAAGC CGGGCGTTGG TTTGCCCGCG CGGGCTAA
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Protein sequence | MPRYHSSLCP PAELEARLRL HRLPETGLRR FRTLLDAFGS ASCALSAPGA AWRALGIPQA TIDARRSAEV RDGALAAMAW LERPGQHLLM WDDPGYPALL AETDDAPPLL FVAGEPALLD RPQLAIVGSR RATPPALDTA RAFSRYLAQA GFTITSGLAV GVDGAAHRAA LQAGGCTIAV LGTGLQKLYP QRHHELAQAM IDNGSALVSE YPLDAGPLPG NFPRRNRIIS GLSLGVLVVE ASLASGSLIT ARLAAEQGRE VYAIPGSIHH PGAKGCHQLI RDGALLVESV EQILESLKGW QNLPPAVVDR FEHPLLALLH AAPQTSESLA HCSELPLAEV LAQLTELELD GRVSNEAGRW FARAG
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