Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0081 |
Symbol | trkA |
ID | 5867769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 87553 |
End bp | 88926 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545154 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_001666333 |
Protein GI | 167031102 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.242422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000177319 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATCA TCATCCTTGG CGCAGGGCAG GTAGGCGGTA CGCTGGCAGA GCACCTGGCC AGCGAAGCGA ACGACATTAC CGTGGTCGAT ACAGACGGCG ACCGCCTGCG CGACCTCGGC GACCGCCTGG ACATCCGTAC CGTGCAGGGC CGCGGCTCGC TGCCGACGGT GCTGCGCCAG GCCGGTGCCG ACGACGCCGA CATGCTGGTG GCGGTCACCA ACAGCGACGA AACCAACATG GTCGCCTGCC AGGTGGCCTA TTCGTTGTTC CACACCCCGA CCAAGATCGC CCGGGTGCGT GAATCGTCCT ACCTGACCCG CGAAGAGCTG TTCGACAACG ACCACATCCC GGTGGACGTG CTGATCAGCC CCGAGCAGGT GGTGACCAAC TACATCAAGC GCCTGATCGA ACACCCAGGC TCGCTGCAAG TAATCGACTT CGCCGAAGGA AAGGCCCAGT TGGTGGCGGT AAAGGCCTAC TACGGCGGCC CGCTGGTCGG CCAGCAACTG CGCCAGATAC GTGCGCACAT GCCCAACGTC GACACCCGCG TGGCGGCCAT CTTCCGCCGC GACCGGCCGA TCACTCCGCG TGGCGACACA GTGATCGAGG CTGACGACGA AGTGTTCTTC ATCGCCGCCA AAAAGGACAT TCGCGCCGTG ATGGGCGAAC TGCGGCGCAT CGACGAAACC AACAAGCGCA TTGTCATCGC CGGCGGCGGG CAGATCGGCG AGCGTCTGGC CGAAGCCATC GAAAGCCGCT ACCAGGTGAA GATCATCGAG ATGAGCCCGG CCCGTTGCCG GCACCTGTCC GATACCCTGG AAAGCACTGT GGTGCTCCAG GGCAGTGCCT CGGACAAGGA CCTGATGCTC GAAGAGAACA TCGCCGATGC CGATATTTTC CTGGCCCTGA CCAACGACGA CGAAGCCAAC ATCATGTCGT CGCTGCTGGC CAAGCGCCTG GGTGCGGGCA AGGTGATGAC CATCATCAAC AACCCGGCCT ATGTCGACCT GGTGCAGGGC GGCGATATCG ACATTGCCAT CAGCCCGCAG CTGGCAACCA TCGGCACCCT GCTGGCGCAC GTGCGCCGGG GCGACATCGT CAGCGTGCAT TCGCTGCGCC GCGGCGCGGC CGAGGCCATC GAGGCCGTGG CGCACGGGGA TTCGAAGTCG AGCAAGGTGG TCGGCAAGGC CATCGAAGAC ATCGCCCTGC CACCGGGTAC CACGATCGGT GCGATCATCC GTGACGAAGA AGTGATGATC GCCCACGACG ACACCATGAT CGAATCGGGG GACCATGTGA TCCTGTTCGT TGTGGATAAA AAGCATATTC GCGATGTGGA AAAGCTGTTC CACGTCGGCT TGAGTTTCTT CTAG
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Protein sequence | MKIIILGAGQ VGGTLAEHLA SEANDITVVD TDGDRLRDLG DRLDIRTVQG RGSLPTVLRQ AGADDADMLV AVTNSDETNM VACQVAYSLF HTPTKIARVR ESSYLTREEL FDNDHIPVDV LISPEQVVTN YIKRLIEHPG SLQVIDFAEG KAQLVAVKAY YGGPLVGQQL RQIRAHMPNV DTRVAAIFRR DRPITPRGDT VIEADDEVFF IAAKKDIRAV MGELRRIDET NKRIVIAGGG QIGERLAEAI ESRYQVKIIE MSPARCRHLS DTLESTVVLQ GSASDKDLML EENIADADIF LALTNDDEAN IMSSLLAKRL GAGKVMTIIN NPAYVDLVQG GDIDIAISPQ LATIGTLLAH VRRGDIVSVH SLRRGAAEAI EAVAHGDSKS SKVVGKAIED IALPPGTTIG AIIRDEEVMI AHDDTMIESG DHVILFVVDK KHIRDVEKLF HVGLSFF
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