| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0078 |
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| Symbol | |
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| ID | 5867766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 85635 |
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| End bp | 86186 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545151 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_001666330 |
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| Protein GI | 167031099 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0674727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000000856753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACGCT GCTTTTGGTG TACCGACGAT CCGTTGTACC AGGCCTACCA TGACCAGGAA
TGGGGAACGC CCCAGCGTGA CCCGGCGTTG CTCTTCGAGA TGCTTTTGCT CGAAGGGTTC
CAGGCCGGGC TTTCGTGGAT CACCGTTTTG CGCAAACGCG AACGATATCG CCAGGTGATG
TACGGCTTCG ACCCGGTGAA ACTGGCCGCC ATGAGCGACG AACGCATCGA AGAACTGATG
CAAGATGCCG GCATCATTCG CAATCGCCTC AAGCTCAAGG CTGCGCGGCG CAACGCGCAA
GCCTGGCTGG CTGTGGATAA CCCTGCGCAA TGGCTGTGGT CGTTCGTCGG CGGCGAGCCG
AAGATCAACC ACTTCAAGGG GCGCGGCGAA GTGCCGGCTG TCACCGACGA AGCCACGGCC
ATGAGCAAGG CCCTGCAGAA AGCCGGCTTC ACCTTTGTCG GCCCGACCAT CTGCTACGCC
TTCATGCAGG CCACCGGCAT GGTCATGGAC CACACCACCG ATTGCGATCG CTACGCCGCC
TTGTTGCGCT GA
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| Protein sequence | MPRCFWCTDD PLYQAYHDQE WGTPQRDPAL LFEMLLLEGF QAGLSWITVL RKRERYRQVM
YGFDPVKLAA MSDERIEELM QDAGIIRNRL KLKAARRNAQ AWLAVDNPAQ WLWSFVGGEP
KINHFKGRGE VPAVTDEATA MSKALQKAGF TFVGPTICYA FMQATGMVMD HTTDCDRYAA
LLR
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